Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FP671120.2-201ENST00000624806 2456 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 SHQ1-203ENST00000463369 2065 ntTSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 SUN5-201ENST00000356173 1254 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 Y_RNA.60-201ENST00000362831 98 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 RNU6-582P-201ENST00000362989 107 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 SNORA20.1-201ENST00000364790 130 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 Y_RNA.463-201ENST00000384271 102 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 SNORA14B-201ENST00000384452 135 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 RNU6-310P-201ENST00000384655 107 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 U3.38-201ENST00000408534 216 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 RPL19P21-201ENST00000424919 591 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC130472.1-201ENST00000427885 309 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 DNAJC19P7-201ENST00000428811 344 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 PCBP2P1-201ENST00000437262 977 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC073109.1-201ENST00000445066 978 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 IFNWP5-201ENST00000445100 588 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC108114.1-201ENST00000477321 437 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 RPSAP51-201ENST00000497462 645 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 H3F3AP3-201ENST00000497682 407 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 GAPDHP35-201ENST00000513369 976 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 IGHVIII-11-1-201ENST00000522733 267 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 GLYATL1P3-201ENST00000527482 909 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 GLYATL1P4-201ENST00000529326 906 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 OR8R1P-201ENST00000543943 764 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AL132640.2-202ENST00000559732 614 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 MIR3942-201ENST00000585264 109 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC093458.1-201ENST00000608912 222 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 BX664608.1-201ENST00000610519 487 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 MIR6883-201ENST00000614952 78 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 FTX_2.1-201ENST00000618816 94 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC015967.1-201ENST00000619893 476 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 PLCE1P1-201ENST00000622094 305 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 AC010149.2-201ENST00000637608 315 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 MIR193BHG-210ENST00000641327 515 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 ST7-213ENST00000432298 1956 ntTSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 NPIPA7-202ENST00000530217 1331 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 LINC02128-205ENST00000641755 1334 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 ENO1P4-201ENST00000416471 1785 ntBASIC8.22□□□□□ -1.09
LHX6Q9UPM6 EGF-206ENST00000509793 4489 ntTSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 GDF9-206ENST00000624492 1823 ntTSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
LHX6Q9UPM6 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 STRADA-226ENST00000638276 1865 ntTSL 5 BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 AC105074.1-201ENST00000623380 3095 ntBASIC8.21□□□□□ -1.09
LHX6Q9UPM6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LHX6Q9UPM6 AL353588.1-201ENST00000505802 3513 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
LHX6Q9UPM6 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC8.21□□□□□ -1.1
LHX6Q9UPM6 AC093297.3-201ENST00000607056 2517 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
LHX6Q9UPM6 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
LHX6Q9UPM6 RPL23AP57-201ENST00000332361 466 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LHX6Q9UPM6 RNA5SP336-201ENST00000364189 117 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 RNU6-169P-201ENST00000365336 107 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 RNA5SP240-201ENST00000365355 128 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
LHX6Q9UPM6 Y_RNA.389-201ENST00000383924 113 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 MED28P1-201ENST00000399158 571 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 SNORA11.3-201ENST00000408471 128 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC8.21□□□□□ -1.1
LHX6Q9UPM6 GAPDHP55-201ENST00000423136 803 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.21□□□□□ -1.1
LHX6Q9UPM6 CR391992.1-201ENST00000438601 394 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 PRPF38AP1-201ENST00000451976 933 ntBASIC8.21□□□□□ -1.1
LHX6Q9UPM6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms