Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 SNORA58B-201ENST00000364259 136 ntBASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 DBIP1-201ENST00000401435 260 ntBASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 AC099670.2-201ENST00000435130 321 ntBASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 AC008536.1-201ENST00000602872 669 ntBASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 AC079753.1-201ENST00000623243 3868 ntBASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.5□□□□□ -1.21
NPC1L1Q9UHC9 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 ZNF402P-201ENST00000404435 3100 ntBASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 RN7SKP6-201ENST00000364795 319 ntBASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 OR3A2-201ENST00000408891 1076 ntBASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 AL158827.1-201ENST00000416300 391 ntBASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 SETP4-201ENST00000455717 868 ntBASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 AC090638.1-201ENST00000498296 909 ntBASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 AL139124.1-201ENST00000609123 421 ntBASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 AL356608.1-201ENST00000610034 820 ntBASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 MIR8080-201ENST00000622224 89 ntBASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 AC013268.3-201ENST00000262716 2324 ntBASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
NPC1L1Q9UHC9 AL162456.1-201ENST00000634535 2006 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 OR9K1P-201ENST00000326513 941 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AL672138.1-201ENST00000450604 1015 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AC100832.1-201ENST00000471945 383 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AC090058.1-201ENST00000498788 435 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 IMMP1LP3-201ENST00000604197 224 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AC010245.2-201ENST00000606908 1167 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AC000068.2-201ENST00000608816 460 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AC007204.2-201ENST00000615022 616 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms