Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC022905.1-201ENST00000503430 3048 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 SNORD16-201ENST00000362803 99 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AL353625.1-202ENST00000366273 571 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 Y_RNA.505-201ENST00000384489 102 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 HMGB3P19-201ENST00000403971 560 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 DNAJA1P1-201ENST00000425106 1187 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 FABP5P3-201ENST00000437960 408 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 HMGN1P36-201ENST00000446623 298 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC004022.1-201ENST00000447766 1066 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 MYO5BP2-201ENST00000449815 1277 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AL133351.3-201ENST00000454998 193 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 RN7SL369P-201ENST00000477138 299 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC020779.1-201ENST00000478757 796 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC091965.3-201ENST00000506236 208 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 OR4D12P-201ENST00000509361 911 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 Y_RNA.667-201ENST00000516212 107 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC008429.4-201ENST00000521201 182 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 OR7E18P-201ENST00000592589 702 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC068768.2-201ENST00000602352 343 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC107952.2-201ENST00000606048 486 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC068792.1-201ENST00000621354 417 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC006927.2-201ENST00000639256 389 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AL136984.1-201ENST00000607611 1893 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AC099786.3-201ENST00000565735 1410 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 CUBNP3-201ENST00000457461 1784 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 AL078595.2-201ENST00000605309 1780 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 SHQ1P1-201ENST00000437111 1544 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 CYP2G2P-201ENST00000594920 1485 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 CR382285.2-201ENST00000624662 1495 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 OR52B3P-201ENST00000314715 928 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 Y_RNA.436-201ENST00000384097 102 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 MIR1178-201ENST00000408396 91 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 OSTCP5-201ENST00000425293 453 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 MTCO3P30-201ENST00000426425 670 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 RPL34P27-201ENST00000428810 349 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 RPS26P4-201ENST00000431743 355 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 MTCO2P7-201ENST00000446518 666 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 ACA64.1-201ENST00000459171 127 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms