Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 SNORA21-201ENST00000362423 132 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 SNORA51.9-201ENST00000384295 124 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 PTGES3P2-201ENST00000407942 482 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 MTND4P11-201ENST00000417020 1058 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC130360.1-201ENST00000425489 1117 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 RPS3AP38-201ENST00000435889 763 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC073072.2-201ENST00000447425 348 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 ACA64.4-201ENST00000459070 127 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC130365.2-201ENST00000525882 1201 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 OR7E10P-201ENST00000526420 991 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC018645.2-201ENST00000609151 472 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 MIR6862-1-201ENST00000613016 70 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 MIR6862-2-201ENST00000614755 70 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AL357562.1-201ENST00000624911 609 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 AC005224.3-201ENST00000584683 2140 ntBASIC6.19□□□□□ -1.42
USP29Q9HBJ7 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 CASC19-238ENST00000641523 1558 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AL161756.3-201ENST00000641216 2071 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AL731532.1-201ENST00000623972 4236 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 RNU6-925P-201ENST00000384629 104 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AL589994.1-201ENST00000404962 340 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 RNA5SP156-201ENST00000410250 110 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 MYL6P5-201ENST00000412707 459 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 RPL35AP31-201ENST00000418340 337 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 RPL12P43-201ENST00000420608 499 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 NME1P1-201ENST00000420914 382 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 RNF2P1-201ENST00000442955 1010 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 TRBV5-2-201ENST00000489095 273 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC016550.1-201ENST00000505348 785 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC025458.1-201ENST00000506046 166 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC060775.1-201ENST00000518241 520 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 GTF2IP11-201ENST00000526931 420 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC027176.2-201ENST00000559166 746 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 MRPS21P8-201ENST00000569196 235 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 MTND1P8-201ENST00000571424 950 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC012146.2-201ENST00000576545 416 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 AC120053.1-201ENST00000607706 736 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 BX323046.1-201ENST00000610145 535 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 LINC00216-201ENST00000623548 1126 ntBASIC6.18□□□□□ -1.42
USP29Q9HBJ7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP29Q9HBJ7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms