Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC021876.1-201ENST00000425959 359 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 RPSAP65-201ENST00000429660 595 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC108479.1-201ENST00000431142 427 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC006326.1-201ENST00000445465 787 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 PPIAP7-201ENST00000454070 489 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 OSTCP1-201ENST00000455507 450 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC092865.4-201ENST00000477936 615 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 RPL29P23-201ENST00000486188 442 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC109635.6-201ENST00000525487 1113 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AP000620.1-201ENST00000527147 504 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 OR4A41P-201ENST00000533053 928 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC087888.1-201ENST00000550884 1254 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC027176.2-201ENST00000559166 746 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC002519.2-203ENST00000567043 837 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 MRPS21P8-201ENST00000569196 235 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AL671309.1-201ENST00000603750 544 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 uc_338.26-201ENST00000612659 160 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AL512506.1-201ENST00000613918 449 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AL445670.1-201ENST00000618889 801 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 FO681491.1-202ENST00000623392 737 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC020978.9-201ENST00000624380 1141 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 SNX18P12-201ENST00000624821 759 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AP001002.1-201ENST00000625148 1513 ntBASIC5.73□□□□□ -1.49
BRF2Q9HAW0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.73□□□□□ -1.49
BRF2Q9HAW0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC007842.1-201ENST00000597336 2039 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC073464.3-201ENST00000422564 712 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC096632.2-201ENST00000438139 1239 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC074367.1-201ENST00000438685 1125 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 HMGB1P7-201ENST00000450921 612 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AL603882.1-201ENST00000463059 681 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC023245.1-201ENST00000468501 517 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 PFN1P6-201ENST00000476786 399 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC098818.1-201ENST00000478593 252 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC079080.1-201ENST00000479841 822 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC093719.1-201ENST00000480427 441 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 CR383656.1-201ENST00000484916 377 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 HAUS1P1-201ENST00000505275 832 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 OR7E99P-201ENST00000505750 922 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 PRMT5P1-201ENST00000514351 598 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 RNA5SP441-201ENST00000516809 88 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC116917.1-201ENST00000520558 305 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 BTG1P1-201ENST00000540396 508 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AL121594.2-201ENST00000541658 472 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC121758.1-202ENST00000556917 658 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC016839.1-201ENST00000578162 867 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 ARGFXP2-201ENST00000579304 949 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 MIR5010-201ENST00000582846 120 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AL158211.2-201ENST00000607282 395 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AL355802.4-201ENST00000607635 548 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC092681.3-201ENST00000609463 678 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AL138960.1-201ENST00000613838 513 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 uc_338.29-201ENST00000615099 168 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 uc_338.31-201ENST00000615595 186 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 AC073488.6-201ENST00000632293 754 ntBASIC5.72□□□□□ -1.49
BRF2Q9HAW0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
BRF2Q9HAW0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms