Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM4Q9C037 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM4Q9C037 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM4Q9C037 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM4Q9C037 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM4Q9C037 AP005136.2-201ENST00000583253 1049 ntBASIC5.9□□□□□ -1.46
TRIM4Q9C037 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 AC006924.1-201ENST00000610750 559 ntBASIC5.9□□□□□ -1.46
TRIM4Q9C037 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 AC099654.11-201ENST00000638857 294 ntBASIC5.9□□□□□ -1.46
TRIM4Q9C037 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 HSPD1P7-201ENST00000447985 1686 ntBASIC5.9□□□□□ -1.47
TRIM4Q9C037 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.9□□□□□ -1.47
TRIM4Q9C037 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.9□□□□□ -1.47
TRIM4Q9C037 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
TRIM4Q9C037 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.47
TRIM4Q9C037 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM4Q9C037 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.9□□□□□ -1.47
TRIM4Q9C037 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.9□□□□□ -1.47
TRIM4Q9C037 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 AL133243.2-201ENST00000610331 1621 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 TMSB4XP2-201ENST00000335179 210 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 DEFA9P-201ENST00000433042 285 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 RPS3AP38-201ENST00000435889 763 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 CST12P-201ENST00000457644 362 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 RN7SL643P-201ENST00000471845 291 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 EIF3LP3-201ENST00000495197 822 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC023424.1-201ENST00000496058 459 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 RPA2P3-201ENST00000533268 770 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC008055.1-201ENST00000547032 609 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC044860.2-201ENST00000561005 179 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC092332.1-201ENST00000563684 829 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 MIR4660-201ENST00000583549 74 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 AL591167.1-201ENST00000607321 456 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC073389.3-201ENST00000609434 935 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AL080312.2-201ENST00000613001 630 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AP005431.1-201ENST00000618479 319 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AF117829.2-201ENST00000619538 361 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 MIR7159-201ENST00000620587 66 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC073488.3-201ENST00000631611 778 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM4Q9C037 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 Z83820.1-201ENST00000456978 1499 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 AC120036.2-201ENST00000509729 1474 ntBASIC5.89□□□□□ -1.47
TRIM4Q9C037 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM4Q9C037 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms