Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 COX6B1P4-201ENST00000519826 484 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX3Q99909 AC136777.2-201ENST00000522979 358 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 TOMM20P1-201ENST00000534518 427 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AC073916.1-201ENST00000545095 130 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 AC002519.2-203ENST00000567043 837 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AC090651.1-201ENST00000567865 634 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AC002310.3-201ENST00000569728 723 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX3Q99909 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 AC005332.4-201ENST00000592752 579 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 AC124856.1-201ENST00000600819 896 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AC100814.1-201ENST00000606963 623 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AL122125.1-201ENST00000616999 600 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX3Q99909 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 AL357140.4-201ENST00000636827 412 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 MAPK10-328ENST00000641553 4009 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SSX3Q99909 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX3Q99909 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX3Q99909 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX3Q99909 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SSX3Q99909 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSX3Q99909 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX3Q99909 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
SSX3Q99909 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SSX3Q99909 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SSX3Q99909 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX3Q99909 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SSX3Q99909 MTCYBP7-201ENST00000419540 1134 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC013470.3-201ENST00000420252 1194 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX3Q99909 AC093084.1-201ENST00000424233 687 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AL354707.3-201ENST00000427308 331 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX3Q99909 AL590399.2-201ENST00000427536 309 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC112492.2-201ENST00000432774 1030 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC094019.1-201ENST00000434678 472 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX3Q99909 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX3Q99909 LYARP1-201ENST00000436977 1501 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AP000936.3-201ENST00000438127 255 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 NEK2P2-201ENST00000438441 1338 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 SOCS5P1-201ENST00000440415 949 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSX3Q99909 AC069277.2-201ENST00000454211 432 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.1□□□□□ -1.59
SSX3Q99909 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
SSX3Q99909 SNX18P26-201ENST00000458433 740 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX3Q99909 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
SSX3Q99909 RPL12P31-201ENST00000478433 450 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC037198.2-201ENST00000478845 733 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 RPL12P30-201ENST00000488389 499 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC114876.1-201ENST00000490962 1366 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.1□□□□□ -1.59
SSX3Q99909 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX3Q99909 AC095052.1-201ENST00000509955 863 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC010343.2-201ENST00000510162 224 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX3Q99909 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX3Q99909 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX3Q99909 AC006512.2-201ENST00000543250 486 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX3Q99909 AL390334.1-201ENST00000556395 450 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX3Q99909 AC097461.1-201ENST00000568928 2821 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX3Q99909 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SSX3Q99909 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX3Q99909 SNX6P1-201ENST00000601728 1224 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AL136984.1-201ENST00000607611 1893 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 MIR6071-201ENST00000616741 78 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 RMST_5.1-201ENST00000618704 126 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
SSX3Q99909 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX3Q99909 AC021106.3-201ENST00000623925 531 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 AC093775.1-201ENST00000624154 1868 ntBASIC5.1□□□□□ -1.59
SSX3Q99909 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX3Q99909 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSX3Q99909 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX3Q99909 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms