Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 NPM1P28-201ENST00000492269 840 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 RN7SL57P-201ENST00000493687 290 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC008945.1-201ENST00000505144 499 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC093763.2-201ENST00000505334 1223 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC010468.3-201ENST00000508225 458 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 ATP5LP3-201ENST00000514223 304 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC006530.1-201ENST00000555980 571 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AL356801.1-201ENST00000559320 294 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 MRPS21P9-201ENST00000571150 257 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AL391001.1-201ENST00000602747 715 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC013244.1-201ENST00000604279 193 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC135178.6-201ENST00000605314 398 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AL356608.1-201ENST00000610034 820 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC012254.5-201ENST00000623573 478 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC022905.1-201ENST00000503430 3048 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC112255.1-201ENST00000624070 2493 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 RN7SKP128-201ENST00000364270 303 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 CYP4F30P-202ENST00000420048 405 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 BX510359.3-201ENST00000422168 306 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC023245.1-201ENST00000468501 517 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC108729.2-201ENST00000476543 840 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC015864.1-201ENST00000496512 544 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC109481.1-201ENST00000509173 282 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 NPM1P21-201ENST00000513394 762 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC016550.3-201ENST00000515706 767 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC010547.6-201ENST00000571789 193 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 BNIP3P35-201ENST00000604530 490 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AC120053.1-201ENST00000607706 736 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 OR13C1P-202ENST00000641378 2919 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 PARP4P2-201ENST00000446672 3326 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 AL356317.1-201ENST00000396110 1436 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGB4Q8WW32 SAMM50P1-201ENST00000455403 1399 ntBASIC6.06□□□□□ -1.44
HMGB4Q8WW32 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGB4Q8WW32 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB4Q8WW32 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGB4Q8WW32 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB4Q8WW32 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB4Q8WW32 AC017002.4-201ENST00000604721 1525 ntBASIC6.05□□□□□ -1.44
HMGB4Q8WW32 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGB4Q8WW32 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB4Q8WW32 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB4Q8WW32 AC027279.4-201ENST00000624371 2072 ntBASIC6.05□□□□□ -1.44
HMGB4Q8WW32 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HMGB4Q8WW32 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGB4Q8WW32 AC079753.1-201ENST00000623243 3868 ntBASIC6.05□□□□□ -1.44
HMGB4Q8WW32 AC005618.1-201ENST00000606901 3148 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms