Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 PABPC1P6-201ENST00000445594 1829 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 RN7SKP59-201ENST00000410520 314 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AP000547.1-201ENST00000454360 617 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 SLC25A51P1-201ENST00000468432 871 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 CR383656.6-201ENST00000550518 394 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 MIR6837-201ENST00000620884 64 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC003992.1-201ENST00000635364 557 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC068733.2-201ENST00000605434 1418 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL360271.1-201ENST00000395679 510 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 METTL15P3-201ENST00000415522 1221 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL139148.1-201ENST00000427122 680 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC099521.1-201ENST00000482557 334 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC023818.1-201ENST00000498379 384 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 RNA5SP400-201ENST00000517155 111 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 NMNAT1P5-201ENST00000559657 841 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 NEPNP-201ENST00000404786 1371 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 OR9K1P-202ENST00000641111 3217 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 SNORA11C-201ENST00000408532 129 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 VN1R54P-201ENST00000435210 1049 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 RPS7P3-201ENST00000443360 580 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 NOP10-202ENST00000557912 436 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL359513.1-201ENST00000614364 557 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AF117829.2-201ENST00000619538 361 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 FBXL21-201ENST00000297158 1305 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 YES1P1-201ENST00000418510 1628 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC011455.2-201ENST00000599320 3336 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 MIR375-201ENST00000362103 64 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 RNA5SP333-201ENST00000363466 118 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 RNA5SP334-201ENST00000364825 118 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 MIR765-201ENST00000390226 114 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AP000534.2-201ENST00000412729 568 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 RPL31P44-201ENST00000447680 377 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 RPL7P45-201ENST00000455851 743 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL672167.3-201ENST00000465951 960 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 CYCSP22-201ENST00000517555 339 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC126615.2-201ENST00000553003 515 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 MIR4505-201ENST00000582238 73 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC109446.4-201ENST00000623235 2755 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC114786.1-201ENST00000512892 1415 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 RPS15AP30-201ENST00000420976 390 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 IGLV3-4-201ENST00000432300 244 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL133445.1-201ENST00000467051 452 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 AL035690.1-201ENST00000490892 383 ntBASIC1.75□□□□□ -2.13
SYNE1Q8NF91 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms