Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 TMCC1P1-201ENST00000518897 1980 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC024651.2-201ENST00000562480 2098 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 MIR1275-201ENST00000408770 80 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 RNU4-64P-201ENST00000410795 131 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 RN7SKP144-201ENST00000411108 279 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 RPL22P18-201ENST00000417197 377 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 KRR1P1-201ENST00000419430 803 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 MTND4P24-201ENST00000424002 397 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 NANOGP5-201ENST00000424456 877 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 RPSAP65-201ENST00000429660 595 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC006994.1-201ENST00000438212 839 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AL512593.1-201ENST00000444758 779 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC010240.2-201ENST00000445363 1205 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AL096829.2-201ENST00000446582 742 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 MTND4LP2-201ENST00000502312 285 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 OR7E99P-201ENST00000505750 922 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 RNA5SP434-201ENST00000516647 121 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AP001207.2-201ENST00000519490 539 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC020916.2-201ENST00000591242 360 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC011492.1-201ENST00000600023 315 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AP001823.1-201ENST00000604056 1003 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 RNU4-5P-201ENST00000607255 135 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC124016.2-201ENST00000610058 665 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 MIR8084-201ENST00000614105 89 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AL357140.4-201ENST00000636827 412 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 MIR3974-201ENST00000637126 96 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC116667.2-201ENST00000641075 823 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 AL121768.1-201ENST00000613917 2544 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK3Q8IV63 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 AC027279.1-201ENST00000568885 4284 ntBASIC6.04□□□□□ -1.44
VRK3Q8IV63 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK3Q8IV63 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK3Q8IV63 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AL022323.4-201ENST00000623980 13120 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 TET1P1-201ENST00000426627 2301 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC119674.1-202ENST00000641333 1860 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK3Q8IV63 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK3Q8IV63 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 LCN1P2-201ENST00000372030 223 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK3Q8IV63 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 RPL7P58-201ENST00000402913 758 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 GCNT1P4-201ENST00000404096 329 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 RN7SKP182-201ENST00000410772 298 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 RPS17P17-201ENST00000419392 409 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AL354707.3-201ENST00000427308 331 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC092447.2-201ENST00000435487 669 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC073648.4-201ENST00000442655 781 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 RPL7P33-201ENST00000444159 742 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 TIMM8BP2-201ENST00000445940 251 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms