Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AL451046.1-201ENST00000406097 534 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AL139805.1-201ENST00000407837 289 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 RNU2-22P-201ENST00000411266 212 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC009237.1-201ENST00000442127 744 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 OR13K1P-201ENST00000444577 975 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 RBMY2TP-201ENST00000451162 947 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC010374.1-201ENST00000503762 1237 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 CYB5AP5-201ENST00000549779 389 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC068305.2-201ENST00000550567 1205 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 BNIP3P38-201ENST00000601117 544 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AL049844.2-201ENST00000604280 628 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC005899.7-201ENST00000618199 588 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 MIR6085-201ENST00000618314 110 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 AC023245.2-201ENST00000530760 2978 ntBASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC144BQ3MJ40 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 ZNF602P-201ENST00000405929 924 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 ZNF736P7Y-201ENST00000425158 820 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 USP12PY-201ENST00000427677 1064 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AC093422.3-201ENST00000428506 305 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 ETF1P3-201ENST00000430422 1160 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 YWHAZP2-201ENST00000440317 728 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 CXCR2P1-202ENST00000443392 1074 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AC010240.2-201ENST00000445363 1205 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AC018638.3-201ENST00000461273 132 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 OR4A6P-201ENST00000534364 970 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 RPP40P2-201ENST00000603596 712 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AL135786.2-201ENST00000608422 615 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AC093673.2-201ENST00000609674 331 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AC010435.1-201ENST00000623353 1177 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 AL132640.2-201ENST00000559968 1698 ntBASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC144BQ3MJ40 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC009779.8-201ENST00000641684 4384 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms