Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC007161.1-204ENST00000423039 460 ntBASIC6.59□□□□□ -1.35
GABPAQ06546 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.59□□□□□ -1.35
GABPAQ06546 RPL7P45-201ENST00000455851 743 ntBASIC6.59□□□□□ -1.35
GABPAQ06546 AC026348.1-201ENST00000462549 1053 ntBASIC6.59□□□□□ -1.35
GABPAQ06546 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
GABPAQ06546 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.59□□□□□ -1.35
GABPAQ06546 AC126177.5-201ENST00000549599 178 ntBASIC6.59□□□□□ -1.35
GABPAQ06546 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.59□□□□□ -1.35
GABPAQ06546 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.59□□□□□ -1.35
GABPAQ06546 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.59□□□□□ -1.35
GABPAQ06546 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
GABPAQ06546 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
GABPAQ06546 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GABPAQ06546 PABPC1P6-201ENST00000445594 1829 ntBASIC6.59□□□□□ -1.35
GABPAQ06546 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.59□□□□□ -1.35
GABPAQ06546 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
GABPAQ06546 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
GABPAQ06546 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.59□□□□□ -1.36
GABPAQ06546 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
GABPAQ06546 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
GABPAQ06546 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.36
GABPAQ06546 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
GABPAQ06546 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.59□□□□□ -1.36
GABPAQ06546 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GABPAQ06546 AC007998.4-201ENST00000612496 2533 ntBASIC6.58□□□□□ -1.36
GABPAQ06546 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
GABPAQ06546 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
GABPAQ06546 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
GABPAQ06546 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.58□□□□□ -1.36
GABPAQ06546 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.58□□□□□ -1.36
GABPAQ06546 GNG5P2-201ENST00000372054 207 ntBASIC6.58□□□□□ -1.36
GABPAQ06546 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.58□□□□□ -1.36
GABPAQ06546 RNU1-136P-201ENST00000384181 164 ntBASIC6.58□□□□□ -1.36
GABPAQ06546 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.58□□□□□ -1.36
GABPAQ06546 RPL35AP24-201ENST00000413846 330 ntBASIC6.58□□□□□ -1.36
GABPAQ06546 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.58□□□□□ -1.36
GABPAQ06546 RNF10P1-201ENST00000418589 369 ntBASIC6.58□□□□□ -1.36
GABPAQ06546 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.58□□□□□ -1.36
GABPAQ06546 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.58□□□□□ -1.36
GABPAQ06546 MYO5BP2-201ENST00000449815 1277 ntBASIC6.58□□□□□ -1.36
GABPAQ06546 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.58□□□□□ -1.36
GABPAQ06546 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.58□□□□□ -1.36
GABPAQ06546 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
GABPAQ06546 PGAM1P13-201ENST00000507497 754 ntBASIC6.58□□□□□ -1.36
GABPAQ06546 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.58□□□□□ -1.36
GABPAQ06546 RN7SKP253-201ENST00000516424 309 ntBASIC6.58□□□□□ -1.36
GABPAQ06546 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.58□□□□□ -1.36
GABPAQ06546 AC016180.1-201ENST00000567945 403 ntBASIC6.58□□□□□ -1.36
GABPAQ06546 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.58□□□□□ -1.36
GABPAQ06546 SDR42E1P1-201ENST00000611327 477 ntBASIC6.58□□□□□ -1.36
GABPAQ06546 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
GABPAQ06546 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.58□□□□□ -1.36
GABPAQ06546 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GABPAQ06546 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.58□□□□□ -1.36
GABPAQ06546 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.58□□□□□ -1.36
GABPAQ06546 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GABPAQ06546 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GABPAQ06546 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
GABPAQ06546 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
GABPAQ06546 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
GABPAQ06546 AL590763.1-201ENST00000398297 1545 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
GABPAQ06546 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
GABPAQ06546 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
GABPAQ06546 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
GABPAQ06546 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.57□□□□□ -1.36
GABPAQ06546 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
GABPAQ06546 RNA5SP326-201ENST00000363209 110 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 RNA5SP335-201ENST00000363817 110 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 RN7SKP6-201ENST00000364795 319 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.57□□□□□ -1.36
GABPAQ06546 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
GABPAQ06546 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
GABPAQ06546 AL009179.1-201ENST00000406085 265 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 DPPA2P3-201ENST00000411853 655 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 AL390774.1-201ENST00000411924 246 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 RNGTTP1-201ENST00000420965 728 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.57□□□□□ -1.36
GABPAQ06546 BRWD1P3-201ENST00000428816 390 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 MEMO1P4-201ENST00000453590 386 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 PDCL3P4-201ENST00000489621 720 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 AC078878.1-201ENST00000539832 958 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 MRPS21P9-201ENST00000571150 257 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 PRELID3BP3-201ENST00000584963 545 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.57□□□□□ -1.36
GABPAQ06546 MIR6837-201ENST00000620884 64 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.57□□□□□ -1.36
GABPAQ06546 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
GABPAQ06546 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.57□□□□□ -1.36
GABPAQ06546 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
GABPAQ06546 XKRY2-202ENST00000623874 1581 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 XKRY-202ENST00000624960 1581 ntBASIC6.57□□□□□ -1.36
GABPAQ06546 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GABPAQ06546 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GABPAQ06546 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GABPAQ06546 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GABPAQ06546 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GABPAQ06546 MIR551A-201ENST00000385042 96 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 AC005042.1-201ENST00000393397 800 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 AC096921.1-201ENST00000411661 375 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms