Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 RBBP4P5-201ENST00000398583 1266 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 GPS2P1-201ENST00000411761 986 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AL035422.1-201ENST00000414193 397 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 RPS4XP5-201ENST00000419038 768 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 RNGTTP1-201ENST00000420965 728 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 NPM1P22-201ENST00000427761 952 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AL445928.1-201ENST00000435545 222 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 GAPDHP59-201ENST00000435908 267 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC023141.8-201ENST00000442554 208 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 OR52I1-201ENST00000450052 1050 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC023245.1-201ENST00000468501 517 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 RN7SL188P-201ENST00000469842 285 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 RN7SL612P-201ENST00000497704 295 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 OR7E158P-201ENST00000524483 910 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AP003033.2-201ENST00000528901 805 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 OR4A41P-201ENST00000533053 928 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC126615.2-201ENST00000553003 515 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC011500.1-201ENST00000601963 469 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AL451049.1-201ENST00000608672 497 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC073488.3-201ENST00000631611 778 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC112198.2-201ENST00000426589 6996 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 CDC27P2-201ENST00000425026 1922 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC008627.1-201ENST00000517511 1704 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 FBXL21-201ENST00000297158 1305 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 SMG1P4-204ENST00000523028 4131 ntBASIC4.4□□□□□ -1.71
HIST1H1AQ02539 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HIST1H1AQ02539 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 RBPJP7-201ENST00000442803 1447 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 RBPJP5-201ENST00000449433 1447 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC011933.2-201ENST00000578539 2790 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 RNA5SP198-201ENST00000410376 127 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AL359885.1-201ENST00000415786 903 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 RPL6P30-201ENST00000443382 862 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 MEMO1P4-201ENST00000453590 386 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC092865.4-201ENST00000477936 615 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AL158068.1-201ENST00000506116 616 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 PRMT5P1-201ENST00000514351 598 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AL671862.1-201ENST00000515851 349 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms