Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 TCP1P3-201ENST00000414406 1498 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 RNU5E-10P-201ENST00000363506 118 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 RNU4-81P-201ENST00000363561 144 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 TAS2R15P-201ENST00000390674 928 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 RNU1-56P-201ENST00000391303 164 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 RPL22P22-201ENST00000395439 379 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AL136100.1-201ENST00000407696 330 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AL157698.1-201ENST00000415190 1011 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 RPL12P43-201ENST00000420608 499 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AL365338.1-201ENST00000422282 858 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 XKRYP1-201ENST00000423438 492 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 ZBTB8OSP2-201ENST00000423890 504 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC092865.3-201ENST00000425390 1026 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC092648.1-201ENST00000425870 423 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC134879.1-201ENST00000426062 394 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 XKRYP2-201ENST00000432915 492 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 KRT8P51-201ENST00000438938 274 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 Z99714.1-201ENST00000450463 807 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 RSU1P1-201ENST00000453416 441 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 GAPDHP53-201ENST00000458397 924 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 RPSAP48-201ENST00000466509 889 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 RN7SL654P-201ENST00000479178 292 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 ST13P12-201ENST00000508958 1094 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC021106.1-201ENST00000509020 1058 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 MRPS5P3-201ENST00000515577 166 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 RNA5SP96-201ENST00000516041 107 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 RNU6-513P-201ENST00000516104 104 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 SNRPCP6-201ENST00000528310 210 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 OR4A41P-201ENST00000533053 928 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 MIR4660-201ENST00000583549 74 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 COX6CP7-201ENST00000597056 208 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC011492.1-201ENST00000600023 315 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC146944.4-201ENST00000602697 718 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC008759.3-201ENST00000613300 508 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC026422.1-201ENST00000623961 452 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC006453.3-201ENST00000635891 377 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
ERVFC1-1P60608 AC096921.2-201ENST00000561507 1916 ntBASIC4.82□□□□□ -1.64
ERVFC1-1P60608 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.81□□□□□ -1.64
ERVFC1-1P60608 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 MTND5P31-201ENST00000419366 1374 ntBASIC4.81□□□□□ -1.64
ERVFC1-1P60608 TRIM53CP-201ENST00000531490 1354 ntBASIC4.81□□□□□ -1.64
ERVFC1-1P60608 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ERVFC1-1P60608 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms