Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S2P59780 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.82□□□□□ -1.64
AP3S2P59780 SNORD56.6-201ENST00000384569 71 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 RNA5SP155-201ENST00000411154 129 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S2P59780 RBMY2JP-201ENST00000425544 1059 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 RPL7P56-201ENST00000429441 717 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S2P59780 CYCSP24-201ENST00000445119 316 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 FTLP8-201ENST00000446770 267 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 PRPF38AP1-201ENST00000451976 933 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 AC002553.3-201ENST00000453002 341 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 AC239798.3-201ENST00000454459 408 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 AC245028.2-201ENST00000458673 253 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 RN7SL515P-201ENST00000463999 297 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 AC020779.1-201ENST00000478757 796 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S2P59780 DUTP1-201ENST00000493631 470 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S2P59780 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S2P59780 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S2P59780 AC096661.1-201ENST00000515870 822 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S2P59780 OR5AM1P-201ENST00000532136 1032 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S2P59780 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.82□□□□□ -1.64
AP3S2P59780 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S2P59780 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S2P59780 AGGF1P7-201ENST00000562369 913 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 OR4C49P-201ENST00000563891 900 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 MIR4685-201ENST00000578185 69 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S2P59780 MIR3936-201ENST00000584304 110 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S2P59780 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S2P59780 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S2P59780 BNIP3P41-202ENST00000616656 861 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S2P59780 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S2P59780 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S2P59780 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S2P59780 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S2P59780 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
AP3S2P59780 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S2P59780 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S2P59780 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
AP3S2P59780 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S2P59780 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.82□□□□□ -1.64
AP3S2P59780 AC027088.4-201ENST00000611559 1947 ntBASIC4.82□□□□□ -1.64
AP3S2P59780 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.81□□□□□ -1.64
AP3S2P59780 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.81□□□□□ -1.64
AP3S2P59780 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
AP3S2P59780 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.81□□□□□ -1.64
AP3S2P59780 AC009220.2-201ENST00000489759 1751 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 CASC19-255ENST00000641733 1385 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 AC004023.1-201ENST00000561473 1744 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 ZNF652P1-201ENST00000442420 1309 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 SNORA21-201ENST00000362423 132 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 MIR130A-201ENST00000385274 89 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.81□□□□□ -1.64
AP3S2P59780 AL356968.2-201ENST00000412769 1257 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.81□□□□□ -1.64
AP3S2P59780 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.81□□□□□ -1.64
AP3S2P59780 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.81□□□□□ -1.64
AP3S2P59780 RPL19P16-201ENST00000433839 588 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 BMS1P10-201ENST00000443754 1120 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.81□□□□□ -1.64
AP3S2P59780 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.81□□□□□ -1.64
AP3S2P59780 AL157777.1-201ENST00000468100 304 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 RN7SL273P-201ENST00000481561 299 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.81□□□□□ -1.64
AP3S2P59780 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.81□□□□□ -1.64
AP3S2P59780 AC091912.1-201ENST00000511351 248 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.81□□□□□ -1.64
AP3S2P59780 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.81□□□□□ -1.64
AP3S2P59780 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.81□□□□□ -1.64
AP3S2P59780 CDC42P3-201ENST00000518493 633 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.81□□□□□ -1.64
AP3S2P59780 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
AP3S2P59780 AC037479.1-201ENST00000558361 625 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.81□□□□□ -1.64
AP3S2P59780 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.81□□□□□ -1.64
AP3S2P59780 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.81□□□□□ -1.64
AP3S2P59780 H3F3BP2-201ENST00000583907 357 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.81□□□□□ -1.64
AP3S2P59780 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.81□□□□□ -1.64
AP3S2P59780 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.81□□□□□ -1.64
AP3S2P59780 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S2P59780 AL731566.1-201ENST00000620490 1937 ntBASIC4.81□□□□□ -1.64
AP3S2P59780 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
AP3S2P59780 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms