Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RPS26P41-201ENST00000450370 284 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN6P56747 RN7SL222P-201ENST00000476452 299 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 AC079841.1-201ENST00000481228 950 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 RPSAP50-201ENST00000481955 852 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 RPL15P21-201ENST00000495592 567 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 CCDC11P1-201ENST00000503137 1162 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 AC147055.3-201ENST00000510547 851 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN6P56747 AC092593.2-201ENST00000513866 913 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN6P56747 OR5D2P-201ENST00000524390 911 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 OR4A40P-201ENST00000533878 948 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN6P56747 MIR4436B2-201ENST00000581415 91 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 MIR4436B1-201ENST00000583272 91 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN6P56747 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN6P56747 AC145423.1-201ENST00000605712 336 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN6P56747 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CLDN6P56747 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CLDN6P56747 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN6P56747 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLDN6P56747 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN6P56747 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN6P56747 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN6P56747 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 RNA5SP319-201ENST00000362768 119 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 RNA5SP131-201ENST00000365452 119 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 SNORA56-201ENST00000383966 129 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 RN7SKP125-201ENST00000410481 302 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN6P56747 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN6P56747 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN6P56747 AC113412.1-201ENST00000425840 504 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 KATNBL1P2-201ENST00000433311 835 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN6P56747 PSMD10P3-201ENST00000437000 448 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN6P56747 RPL23AP60-201ENST00000450011 454 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 AL645937.3-201ENST00000453647 936 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 RN7SL352P-201ENST00000466002 277 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 RPS18P6-201ENST00000476880 458 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.53□□□□□ -1.52
CLDN6P56747 NDUFB5P1-201ENST00000508134 564 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN6P56747 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN6P56747 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN6P56747 OR6M2P-201ENST00000529831 871 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN6P56747 HMGN2P6-201ENST00000551091 273 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN6P56747 AC015720.2-201ENST00000567709 334 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 RN7SL708P-201ENST00000580952 299 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN6P56747 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN6P56747 MIR6837-201ENST00000620884 64 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN6P56747 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLDN6P56747 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN6P56747 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 TTC41P-205ENST00000551270 3963 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 AC090220.1-201ENST00000593078 1699 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN6P56747 AC092692.1-201ENST00000623625 2595 ntBASIC5.53□□□□□ -1.52
CLDN6P56747 AL078595.2-201ENST00000605309 1780 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN6P56747 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN6P56747 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN6P56747 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CLDN6P56747 AC016583.1-201ENST00000624221 2431 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLDN6P56747 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN6P56747 U8.4-201ENST00000363626 134 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms