Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXA3P55318 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 TRIM51GP-201ENST00000534741 1350 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 AC004817.4-201ENST00000602396 3625 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 AC025574.1-201ENST00000554784 1653 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXA3P55318 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
FOXA3P55318 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXA3P55318 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXA3P55318 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXA3P55318 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXA3P55318 OR1L6-202ENST00000373684 1044 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 MIR138-2-201ENST00000384916 84 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 AC016739.1-201ENST00000405359 345 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXA3P55318 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXA3P55318 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 AL138479.1-201ENST00000426913 484 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.17□□□□□ -1.74
FOXA3P55318 TUBB4BP6-201ENST00000437576 479 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 BMS1P10-201ENST00000443754 1120 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 AL157385.1-201ENST00000446973 268 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXA3P55318 RPS7P10-201ENST00000464254 603 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 RPL5P22-201ENST00000480199 884 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXA3P55318 MYL12BP2-201ENST00000503948 512 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXA3P55318 SNX18P25-201ENST00000510539 758 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 SNORA74.1-201ENST00000516320 180 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXA3P55318 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXA3P55318 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 OR5AM1P-201ENST00000532136 1032 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXA3P55318 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXA3P55318 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.17□□□□□ -1.74
FOXA3P55318 AP005136.2-201ENST00000583253 1049 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 H3F3BP2-201ENST00000583907 357 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 MIR3936-201ENST00000584304 110 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.17□□□□□ -1.74
FOXA3P55318 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 AL122023.1-201ENST00000622847 530 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 MIR6503-201ENST00000622884 86 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 SOCS5P3-201ENST00000425115 1576 ntBASIC4.17□□□□□ -1.74
FOXA3P55318 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
FOXA3P55318 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
FOXA3P55318 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXA3P55318 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXA3P55318 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXA3P55318 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXA3P55318 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
FOXA3P55318 AL731532.2-201ENST00000623542 1953 ntBASIC4.16□□□□□ -1.74
FOXA3P55318 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.16□□□□□ -1.74
FOXA3P55318 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXA3P55318 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
FOXA3P55318 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXA3P55318 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
FOXA3P55318 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXA3P55318 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXA3P55318 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXA3P55318 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
FOXA3P55318 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXA3P55318 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXA3P55318 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
FOXA3P55318 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
FOXA3P55318 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXA3P55318 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
FOXA3P55318 RNU1-134P-201ENST00000362935 165 ntBASIC4.16□□□□□ -1.74
FOXA3P55318 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXA3P55318 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
FOXA3P55318 PPIAP9-201ENST00000403866 498 ntBASIC4.16□□□□□ -1.74
FOXA3P55318 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXA3P55318 NPM1P40-201ENST00000412758 733 ntBASIC4.16□□□□□ -1.74
FOXA3P55318 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms