Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC099654.15-201ENST00000639802 509 ntBASIC5.52□□□□□ -1.53
CDH12P55289 AC010325.3-201ENST00000641084 394 ntBASIC5.52□□□□□ -1.53
CDH12P55289 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CDH12P55289 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CDH12P55289 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 BCORP1-203ENST00000513194 5093 ntBASIC5.52□□□□□ -1.53
CDH12P55289 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH12P55289 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH12P55289 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDH12P55289 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CDH12P55289 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDH12P55289 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH12P55289 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDH12P55289 AL353692.2-201ENST00000407054 335 ntBASIC5.51□□□□□ -1.53
CDH12P55289 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH12P55289 METTL15P3-201ENST00000415522 1221 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AL359885.1-201ENST00000415786 903 ntBASIC5.51□□□□□ -1.53
CDH12P55289 VN1R37P-201ENST00000419096 748 ntBASIC5.51□□□□□ -1.53
CDH12P55289 MARK2P12-201ENST00000420129 585 ntBASIC5.51□□□□□ -1.53
CDH12P55289 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH12P55289 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH12P55289 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH12P55289 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.51□□□□□ -1.53
CDH12P55289 ZNF619P1-201ENST00000446539 752 ntBASIC5.51□□□□□ -1.53
CDH12P55289 HMGN1P5-201ENST00000448591 263 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH12P55289 RN7SL552P-201ENST00000462094 276 ntBASIC5.51□□□□□ -1.53
CDH12P55289 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH12P55289 AC105918.1-201ENST00000474399 838 ntBASIC5.51□□□□□ -1.53
CDH12P55289 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDH12P55289 AC093815.1-201ENST00000508637 280 ntBASIC5.51□□□□□ -1.53
CDH12P55289 HMGB1P47-201ENST00000511281 589 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AC078899.1-201ENST00000521432 1185 ntBASIC5.51□□□□□ -1.53
CDH12P55289 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AC138701.1-201ENST00000524329 714 ntBASIC5.51□□□□□ -1.53
CDH12P55289 OR56A7P-201ENST00000524865 941 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH12P55289 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH12P55289 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH12P55289 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CDH12P55289 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDH12P55289 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH12P55289 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH12P55289 AL049840.6-201ENST00000604583 345 ntBASIC5.51□□□□□ -1.53
CDH12P55289 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH12P55289 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH12P55289 AC018690.1-201ENST00000608144 626 ntBASIC5.51□□□□□ -1.53
CDH12P55289 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 AC025016.1-201ENST00000616746 682 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AC008147.4-201ENST00000617570 1204 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AC095038.2-201ENST00000621464 1070 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AC090506.2-201ENST00000624521 419 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH12P55289 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDH12P55289 CASC19-260ENST00000641828 2001 ntBASIC5.51□□□□□ -1.53
CDH12P55289 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CDH12P55289 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH12P55289 AC123769.1-201ENST00000530992 3192 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AC027279.4-201ENST00000624371 2072 ntBASIC5.51□□□□□ -1.53
CDH12P55289 AC011933.2-201ENST00000578539 2790 ntBASIC5.5□□□□□ -1.53
CDH12P55289 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH12P55289 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH12P55289 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CDH12P55289 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH12P55289 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CDH12P55289 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CDH12P55289 AC114774.1-201ENST00000507410 1770 ntBASIC5.5□□□□□ -1.53
CDH12P55289 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH12P55289 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH12P55289 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH12P55289 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH12P55289 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
CDH12P55289 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CDH12P55289 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH12P55289 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH12P55289 ST13P16-201ENST00000401760 781 ntBASIC5.5□□□□□ -1.53
CDH12P55289 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH12P55289 RNA5SP198-201ENST00000410376 127 ntBASIC5.5□□□□□ -1.53
CDH12P55289 RPL35AP31-201ENST00000418340 337 ntBASIC5.5□□□□□ -1.53
CDH12P55289 NMD3P2-201ENST00000421815 761 ntBASIC5.5□□□□□ -1.53
CDH12P55289 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH12P55289 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH12P55289 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH12P55289 AL513321.1-201ENST00000441175 761 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms