Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH4P55283 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CDH4P55283 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH4P55283 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH4P55283 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH4P55283 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDH4P55283 AC087752.1-201ENST00000391360 558 ntBASIC5.83□□□□□ -1.48
CDH4P55283 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH4P55283 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH4P55283 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH4P55283 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH4P55283 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH4P55283 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH4P55283 AP000281.1-201ENST00000444036 316 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AL450996.1-201ENST00000445574 1202 ntBASIC5.83□□□□□ -1.48
CDH4P55283 EEF1B2P6-201ENST00000445713 673 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH4P55283 RPL12P39-201ENST00000455456 496 ntBASIC5.83□□□□□ -1.48
CDH4P55283 RPS7P6-201ENST00000485777 579 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH4P55283 AC074087.1-201ENST00000512059 724 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.83□□□□□ -1.48
CDH4P55283 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.83□□□□□ -1.48
CDH4P55283 HSPE1P2-201ENST00000554777 306 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AL049872.1-201ENST00000556323 322 ntBASIC5.83□□□□□ -1.48
CDH4P55283 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH4P55283 AC020978.7-201ENST00000575953 1187 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AC012146.2-201ENST00000576545 416 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AP001267.4-201ENST00000602598 545 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH4P55283 AC008115.3-201ENST00000614874 549 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AL353684.1-201ENST00000622677 1120 ntBASIC5.83□□□□□ -1.48
CDH4P55283 CU639417.4-201ENST00000623928 207 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AC007683.2-201ENST00000624681 714 ntBASIC5.83□□□□□ -1.48
CDH4P55283 AP001153.1-201ENST00000641024 338 ntBASIC5.83□□□□□ -1.48
CDH4P55283 YES1P1-201ENST00000418510 1628 ntBASIC5.83□□□□□ -1.48
CDH4P55283 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH4P55283 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CDH4P55283 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CDH4P55283 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH4P55283 AC239868.2-201ENST00000564237 4527 ntBASIC5.83□□□□□ -1.48
CDH4P55283 LINC01963-201ENST00000562038 3148 ntBASIC5.83□□□□□ -1.48
CDH4P55283 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CDH4P55283 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 AL121839.2-201ENST00000565058 6943 ntBASIC5.82□□□□□ -1.48
CDH4P55283 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDH4P55283 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH4P55283 RPS6P23-201ENST00000413224 722 ntBASIC5.82□□□□□ -1.48
CDH4P55283 AL596448.1-201ENST00000415024 392 ntBASIC5.82□□□□□ -1.48
CDH4P55283 NAP1L4P2-201ENST00000425958 899 ntBASIC5.82□□□□□ -1.48
CDH4P55283 AL391987.1-201ENST00000441025 200 ntBASIC5.82□□□□□ -1.48
CDH4P55283 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CDH4P55283 RN7SL717P-201ENST00000478343 297 ntBASIC5.82□□□□□ -1.48
CDH4P55283 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH4P55283 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.82□□□□□ -1.48
CDH4P55283 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH4P55283 AC027544.3-201ENST00000535082 757 ntBASIC5.82□□□□□ -1.48
CDH4P55283 AC139697.1-201ENST00000548429 745 ntBASIC5.82□□□□□ -1.48
CDH4P55283 AC022404.1-201ENST00000555320 273 ntBASIC5.82□□□□□ -1.48
CDH4P55283 AC107993.1-201ENST00000591343 684 ntBASIC5.82□□□□□ -1.48
CDH4P55283 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CDH4P55283 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH4P55283 FO393422.1-201ENST00000603908 708 ntBASIC5.82□□□□□ -1.48
CDH4P55283 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH4P55283 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH4P55283 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
CDH4P55283 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH4P55283 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDH4P55283 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 LINC02019-201ENST00000608605 2060 ntBASIC5.82□□□□□ -1.48
CDH4P55283 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CDH4P55283 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH4P55283 AC114786.1-201ENST00000512892 1415 ntBASIC5.82□□□□□ -1.48
CDH4P55283 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CDH4P55283 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDH4P55283 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH4P55283 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH4P55283 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH4P55283 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH4P55283 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH4P55283 AC027279.1-201ENST00000568885 4284 ntBASIC5.81□□□□□ -1.48
CDH4P55283 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDH4P55283 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH4P55283 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH4P55283 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH4P55283 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDH4P55283 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH4P55283 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH4P55283 MIR323A-201ENST00000362199 86 ntBASIC5.81□□□□□ -1.48
CDH4P55283 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.81□□□□□ -1.48
CDH4P55283 GAPDHP42-201ENST00000406848 981 ntBASIC5.81□□□□□ -1.48
CDH4P55283 AL512422.1-201ENST00000407033 553 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms