Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGCS2P54868 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGCS2P54868 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGCS2P54868 AC022164.1-201ENST00000568767 2673 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HMGCS2P54868 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGCS2P54868 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGCS2P54868 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HMGCS2P54868 MIR133B-201ENST00000362210 119 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 SNORA16A-201ENST00000384342 137 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 AL590762.4-201ENST00000425885 253 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 MEMO1P4-201ENST00000453590 386 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
HMGCS2P54868 RPL17P2-201ENST00000491913 451 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 RN7SL447P-201ENST00000494711 245 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 AC023818.1-201ENST00000498379 384 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.47□□□□□ -1.37
HMGCS2P54868 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGCS2P54868 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGCS2P54868 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.47□□□□□ -1.37
HMGCS2P54868 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.47□□□□□ -1.37
HMGCS2P54868 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGCS2P54868 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGCS2P54868 AC087763.1-201ENST00000603391 286 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGCS2P54868 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGCS2P54868 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGCS2P54868 AC020656.2-201ENST00000613291 5309 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGCS2P54868 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HMGCS2P54868 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
HMGCS2P54868 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMGCS2P54868 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGCS2P54868 AL034546.1-201ENST00000623740 3693 ntBASIC6.47□□□□□ -1.37
HMGCS2P54868 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HMGCS2P54868 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
HMGCS2P54868 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMGCS2P54868 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.47□□□□□ -1.37
HMGCS2P54868 AC007938.2-201ENST00000604666 2634 ntBASIC6.46□□□□□ -1.37
HMGCS2P54868 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMGCS2P54868 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
HMGCS2P54868 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMGCS2P54868 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMGCS2P54868 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
HMGCS2P54868 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
HMGCS2P54868 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGCS2P54868 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGCS2P54868 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGCS2P54868 RNU1-106P-201ENST00000384382 164 ntBASIC6.46□□□□□ -1.38
HMGCS2P54868 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGCS2P54868 AC108075.1-201ENST00000424692 529 ntBASIC6.46□□□□□ -1.38
HMGCS2P54868 AC092106.1-201ENST00000444291 373 ntBASIC6.46□□□□□ -1.38
HMGCS2P54868 AC105399.1-202ENST00000447303 205 ntBASIC6.46□□□□□ -1.38
HMGCS2P54868 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGCS2P54868 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGCS2P54868 AC022832.1-201ENST00000530718 645 ntBASIC6.46□□□□□ -1.38
HMGCS2P54868 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGCS2P54868 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGCS2P54868 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HMGCS2P54868 AC106730.2-201ENST00000566641 540 ntBASIC6.46□□□□□ -1.38
HMGCS2P54868 RBM22P1-201ENST00000578589 1214 ntBASIC6.46□□□□□ -1.38
HMGCS2P54868 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.46□□□□□ -1.38
HMGCS2P54868 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGCS2P54868 MIR6798-201ENST00000612887 67 ntBASIC6.46□□□□□ -1.38
HMGCS2P54868 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGCS2P54868 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
HMGCS2P54868 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGCS2P54868 AC011493.1-201ENST00000596753 1632 ntBASIC6.46□□□□□ -1.38
HMGCS2P54868 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGCS2P54868 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
HMGCS2P54868 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HMGCS2P54868 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGCS2P54868 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGCS2P54868 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGCS2P54868 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGCS2P54868 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
HMGCS2P54868 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.45□□□□□ -1.38
HMGCS2P54868 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGCS2P54868 AL137141.1-201ENST00000624622 4836 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HMGCS2P54868 AC103591.2-201ENST00000265259 766 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGCS2P54868 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HMGCS2P54868 RNA5SP91-201ENST00000390902 119 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.45□□□□□ -1.38
HMGCS2P54868 VN1R21P-201ENST00000426703 765 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 FAM96AP1-201ENST00000430879 482 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 AL365220.1-201ENST00000432923 399 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 PSMD10P3-201ENST00000437000 448 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 RPL35AP28-201ENST00000459730 331 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.45□□□□□ -1.38
HMGCS2P54868 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.45□□□□□ -1.38
HMGCS2P54868 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.45□□□□□ -1.38
HMGCS2P54868 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms