Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 HMGB1P1-201ENST00000522557 636 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.79□□□□□ -1.32
EPHB3P54753 RN7SL366P-201ENST00000577957 292 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 DPRXP4-201ENST00000578053 568 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.79□□□□□ -1.32
EPHB3P54753 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 FAM60CP-201ENST00000591086 664 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.79□□□□□ -1.32
EPHB3P54753 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 AL078623.1-201ENST00000602702 907 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 RPSAP75-201ENST00000605848 301 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 AC109347.2-201ENST00000610220 349 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 MIR1264-201ENST00000616374 69 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.79□□□□□ -1.32
EPHB3P54753 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 AL035661.1-201ENST00000620459 1144 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.79□□□□□ -1.32
EPHB3P54753 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC6.79□□□□□ -1.32
EPHB3P54753 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.79□□□□□ -1.32
EPHB3P54753 OR4G1P-202ENST00000641173 1788 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.79□□□□□ -1.32
EPHB3P54753 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.79□□□□□ -1.32
EPHB3P54753 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
EPHB3P54753 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.78□□□□□ -1.32
EPHB3P54753 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
EPHB3P54753 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 RNU6-304P-201ENST00000364855 107 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.78□□□□□ -1.32
EPHB3P54753 RNU5A-2P-201ENST00000384337 116 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AL035422.1-201ENST00000414193 397 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
EPHB3P54753 AC115283.1-201ENST00000427353 400 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 FO393414.1-201ENST00000428697 1184 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 AC091390.2-201ENST00000432573 374 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.78□□□□□ -1.32
EPHB3P54753 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.78□□□□□ -1.32
EPHB3P54753 AL008629.1-201ENST00000438615 184 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AL445567.1-201ENST00000439121 144 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.78□□□□□ -1.32
EPHB3P54753 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.78□□□□□ -1.32
EPHB3P54753 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.78□□□□□ -1.32
EPHB3P54753 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 MTND3P5-201ENST00000512798 333 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 RNU6-889P-201ENST00000517189 103 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.78□□□□□ -1.32
EPHB3P54753 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.78□□□□□ -1.32
EPHB3P54753 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.78□□□□□ -1.32
EPHB3P54753 TPRX1P1-201ENST00000557620 319 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.78□□□□□ -1.32
EPHB3P54753 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 AL133247.2-201ENST00000603236 482 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AL157899.1-201ENST00000604110 936 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AC124916.2-201ENST00000604416 224 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 TSHZ2-205ENST00000626626 670 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
EPHB3P54753 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.78□□□□□ -1.32
EPHB3P54753 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
EPHB3P54753 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 AP002833.3-201ENST00000625075 2265 ntBASIC6.78□□□□□ -1.32
EPHB3P54753 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
EPHB3P54753 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
EPHB3P54753 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
EPHB3P54753 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
EPHB3P54753 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
EPHB3P54753 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.77□□□□□ -1.32
EPHB3P54753 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.77□□□□□ -1.32
EPHB3P54753 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
EPHB3P54753 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.77□□□□□ -1.33
EPHB3P54753 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms