Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 FAM27E4-201ENST00000605259 342 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AC007786.3-201ENST00000615154 596 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AL035661.1-201ENST00000620459 1144 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AL683826.1-201ENST00000624104 627 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.02□□□□□ -1.61
CX3CR1P49238 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CX3CR1P49238 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CX3CR1P49238 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CR1P49238 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CR1P49238 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CX3CR1P49238 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CR1P49238 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CR1P49238 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CR1P49238 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CR1P49238 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CR1P49238 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CR1P49238 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CR1P49238 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CR1P49238 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CX3CR1P49238 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CR1P49238 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CX3CR1P49238 AL357752.1-201ENST00000412817 349 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CR1P49238 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 CLNS1AP1-201ENST00000435954 682 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 AMYP1-201ENST00000440059 1023 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CR1P49238 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CR1P49238 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CR1P49238 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CR1P49238 ASNSP4-201ENST00000511103 447 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CR1P49238 GAPDHP62-201ENST00000515313 990 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 RN7SKP183-201ENST00000517169 324 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 AC138832.1-201ENST00000522871 556 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CX3CR1P49238 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CR1P49238 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CR1P49238 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.01□□□□□ -1.61
CX3CR1P49238 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CR1P49238 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CR1P49238 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CR1P49238 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CR1P49238 MIR4260-201ENST00000583107 67 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CR1P49238 AC048341.3-201ENST00000619323 491 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CR1P49238 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CR1P49238 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CR1P49238 LYARP1-201ENST00000436977 1501 ntBASIC5.01□□□□□ -1.61
CX3CR1P49238 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CX3CR1P49238 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
CX3CR1P49238 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CX3CR1P49238 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CX3CR1P49238 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5□□□□□ -1.61
CX3CR1P49238 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CX3CR1P49238 AC092111.2-201ENST00000611627 1414 ntBASIC5□□□□□ -1.61
CX3CR1P49238 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CX3CR1P49238 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CX3CR1P49238 RNU1-65P-201ENST00000363919 148 ntBASIC5□□□□□ -1.61
CX3CR1P49238 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CX3CR1P49238 MIR130A-201ENST00000385274 89 ntBASIC5□□□□□ -1.61
CX3CR1P49238 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5□□□□□ -1.61
CX3CR1P49238 RNA5SP431-201ENST00000410312 120 ntBASIC5□□□□□ -1.61
CX3CR1P49238 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5□□□□□ -1.61
CX3CR1P49238 OR10T1P-201ENST00000424327 947 ntBASIC5□□□□□ -1.61
CX3CR1P49238 PRUNEP1-201ENST00000425846 705 ntBASIC5□□□□□ -1.61
CX3CR1P49238 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CX3CR1P49238 AC007679.3-201ENST00000434035 414 ntBASIC5□□□□□ -1.61
CX3CR1P49238 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5□□□□□ -1.61
CX3CR1P49238 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5□□□□□ -1.61
CX3CR1P49238 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5□□□□□ -1.61
CX3CR1P49238 RPL9P15-201ENST00000491096 532 ntBASIC5□□□□□ -1.61
CX3CR1P49238 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5□□□□□ -1.61
CX3CR1P49238 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5□□□□□ -1.61
CX3CR1P49238 AC074255.1-201ENST00000511259 501 ntBASIC5□□□□□ -1.61
CX3CR1P49238 Vault.2-201ENST00000516519 98 ntBASIC5□□□□□ -1.61
CX3CR1P49238 AC139365.2-201ENST00000517972 253 ntBASIC5□□□□□ -1.61
CX3CR1P49238 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5□□□□□ -1.61
CX3CR1P49238 IGLV3-30-201ENST00000524362 298 ntBASIC5□□□□□ -1.61
CX3CR1P49238 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5□□□□□ -1.61
CX3CR1P49238 AP004609.2-201ENST00000532177 190 ntBASIC5□□□□□ -1.61
CX3CR1P49238 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5□□□□□ -1.61
CX3CR1P49238 AC139697.1-201ENST00000548429 745 ntBASIC5□□□□□ -1.61
CX3CR1P49238 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5□□□□□ -1.61
CX3CR1P49238 AC079905.1-201ENST00000549280 475 ntBASIC5□□□□□ -1.61
CX3CR1P49238 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CX3CR1P49238 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5□□□□□ -1.61
CX3CR1P49238 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5□□□□□ -1.61
CX3CR1P49238 AL356752.1-201ENST00000615844 593 ntBASIC5□□□□□ -1.61
CX3CR1P49238 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5□□□□□ -1.61
CX3CR1P49238 AC073592.6-201ENST00000624271 415 ntBASIC5□□□□□ -1.61
CX3CR1P49238 AC073869.7-201ENST00000640874 297 ntBASIC5□□□□□ -1.61
CX3CR1P49238 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms