Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.4□□□□□ -1.55
SOX2P48431 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.4□□□□□ -1.55
SOX2P48431 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SOX2P48431 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SOX2P48431 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SOX2P48431 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
SOX2P48431 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.4□□□□□ -1.55
SOX2P48431 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SOX2P48431 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SOX2P48431 AC009220.2-201ENST00000489759 1751 ntBASIC5.39□□□□□ -1.55
SOX2P48431 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 AC112255.1-201ENST00000624070 2493 ntBASIC5.39□□□□□ -1.55
SOX2P48431 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SOX2P48431 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 RN7SKP74-201ENST00000362849 309 ntBASIC5.39□□□□□ -1.55
SOX2P48431 RNU5B-4P-201ENST00000363508 111 ntBASIC5.39□□□□□ -1.55
SOX2P48431 RNU6-207P-201ENST00000384137 107 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AP002784.2-201ENST00000397300 549 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AL353133.1-201ENST00000407695 401 ntBASIC5.39□□□□□ -1.55
SOX2P48431 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 RPL26P37-201ENST00000411983 438 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.39□□□□□ -1.55
SOX2P48431 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.39□□□□□ -1.55
SOX2P48431 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.39□□□□□ -1.55
SOX2P48431 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.39□□□□□ -1.55
SOX2P48431 AL590399.2-201ENST00000427536 309 ntBASIC5.39□□□□□ -1.55
SOX2P48431 RPS7P2-201ENST00000435134 607 ntBASIC5.39□□□□□ -1.55
SOX2P48431 RPS3AP38-201ENST00000435889 763 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.39□□□□□ -1.55
SOX2P48431 MED6P1-201ENST00000439659 713 ntBASIC5.39□□□□□ -1.55
SOX2P48431 COL11A2P1-205ENST00000441798 676 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AL356133.1-201ENST00000444762 372 ntBASIC5.39□□□□□ -1.55
SOX2P48431 MTATP6P26-201ENST00000445926 662 ntBASIC5.39□□□□□ -1.55
SOX2P48431 MORF4-201ENST00000447135 971 ntBASIC5.39□□□□□ -1.55
SOX2P48431 MTND6P5-201ENST00000448266 512 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AL031313.1-201ENST00000448435 256 ntBASIC5.39□□□□□ -1.55
SOX2P48431 MTND1P31-201ENST00000449206 961 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.39□□□□□ -1.55
SOX2P48431 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.39□□□□□ -1.55
SOX2P48431 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 RN7SL352P-201ENST00000466002 277 ntBASIC5.39□□□□□ -1.55
SOX2P48431 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.39□□□□□ -1.55
SOX2P48431 GOLGA5P1-201ENST00000507317 980 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.39□□□□□ -1.55
SOX2P48431 RNU6-276P-201ENST00000516114 96 ntBASIC5.39□□□□□ -1.55
SOX2P48431 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.39□□□□□ -1.55
SOX2P48431 AC103855.4-201ENST00000533158 265 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.39□□□□□ -1.55
SOX2P48431 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.39□□□□□ -1.55
SOX2P48431 MTND3P12-201ENST00000559068 328 ntBASIC5.39□□□□□ -1.55
SOX2P48431 MIR4420-201ENST00000583944 77 ntBASIC5.39□□□□□ -1.55
SOX2P48431 MTCO2P22-201ENST00000603246 681 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AC099785.1-201ENST00000605697 437 ntBASIC5.39□□□□□ -1.55
SOX2P48431 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 MIR6736-201ENST00000616799 59 ntBASIC5.39□□□□□ -1.55
SOX2P48431 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 AL137067.2-201ENST00000621202 131 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AC068057.2-201ENST00000624047 895 ntBASIC5.39□□□□□ -1.55
SOX2P48431 AC103703.1-201ENST00000634783 663 ntBASIC5.39□□□□□ -1.55
SOX2P48431 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SOX2P48431 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SOX2P48431 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SOX2P48431 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.39□□□□□ -1.55
SOX2P48431 AL359091.1-201ENST00000449048 1734 ntBASIC5.39□□□□□ -1.55
SOX2P48431 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.39□□□□□ -1.55
SOX2P48431 AC026523.2-201ENST00000625039 7739 ntBASIC5.39□□□□□ -1.55
SOX2P48431 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SOX2P48431 ICE2P1-201ENST00000512800 1849 ntBASIC5.39□□□□□ -1.55
SOX2P48431 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SOX2P48431 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX2P48431 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.38□□□□□ -1.55
SOX2P48431 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SOX2P48431 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 HSPD1P7-201ENST00000447985 1686 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC024587.1-201ENST00000505925 2157 ntBASIC5.38□□□□□ -1.55
SOX2P48431 SNORD1C-201ENST00000363315 78 ntBASIC5.38□□□□□ -1.55
SOX2P48431 RNA5SP302-201ENST00000364896 100 ntBASIC5.38□□□□□ -1.55
SOX2P48431 OR13C3-201ENST00000374781 1108 ntBASIC5.38□□□□□ -1.55
SOX2P48431 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SOX2P48431 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SOX2P48431 HMGB1P10-201ENST00000395823 563 ntBASIC5.38□□□□□ -1.55
SOX2P48431 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 RNU2-17P-201ENST00000410290 190 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AL158825.1-201ENST00000414735 521 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms