Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.98□□□□□ -1.61
CDX1P47902 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CDX1P47902 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDX1P47902 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDX1P47902 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDX1P47902 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.98□□□□□ -1.61
CDX1P47902 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.98□□□□□ -1.61
CDX1P47902 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.97□□□□□ -1.61
CDX1P47902 UGT2B26P-201ENST00000508672 1613 ntBASIC4.97□□□□□ -1.61
CDX1P47902 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CDX1P47902 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CDX1P47902 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.97□□□□□ -1.61
CDX1P47902 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 RPL11P4-201ENST00000332269 436 ntBASIC4.97□□□□□ -1.61
CDX1P47902 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.97□□□□□ -1.61
CDX1P47902 RNA5SP232-201ENST00000364144 119 ntBASIC4.97□□□□□ -1.61
CDX1P47902 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDX1P47902 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.97□□□□□ -1.61
CDX1P47902 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDX1P47902 MIR621-201ENST00000384919 96 ntBASIC4.97□□□□□ -1.61
CDX1P47902 MIR188-201ENST00000385034 86 ntBASIC4.97□□□□□ -1.61
CDX1P47902 MT-TP-201ENST00000387461 68 ntBASIC4.97□□□□□ -1.61
CDX1P47902 OSTCP4-201ENST00000424397 449 ntBASIC4.97□□□□□ -1.61
CDX1P47902 MTATP6P11-201ENST00000428071 670 ntBASIC4.97□□□□□ -1.61
CDX1P47902 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.97□□□□□ -1.61
CDX1P47902 RPS26P4-201ENST00000431743 355 ntBASIC4.97□□□□□ -1.61
CDX1P47902 IGLV3-4-201ENST00000432300 244 ntBASIC4.97□□□□□ -1.61
CDX1P47902 NPM1P18-201ENST00000434232 732 ntBASIC4.97□□□□□ -1.61
CDX1P47902 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.97□□□□□ -1.61
CDX1P47902 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC4.97□□□□□ -1.61
CDX1P47902 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.97□□□□□ -1.61
CDX1P47902 RPSAP40-201ENST00000442343 891 ntBASIC4.97□□□□□ -1.61
CDX1P47902 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.97□□□□□ -1.61
CDX1P47902 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.97□□□□□ -1.61
CDX1P47902 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.97□□□□□ -1.61
CDX1P47902 AC022415.1-202ENST00000486612 523 ntBASIC4.97□□□□□ -1.61
CDX1P47902 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 OR9N1P-202ENST00000494289 481 ntBASIC4.97□□□□□ -1.61
CDX1P47902 AC091874.2-201ENST00000505889 720 ntBASIC4.97□□□□□ -1.61
CDX1P47902 AC112484.3-201ENST00000505910 329 ntBASIC4.97□□□□□ -1.61
CDX1P47902 RNA5SP473-201ENST00000516402 125 ntBASIC4.97□□□□□ -1.61
CDX1P47902 MTCYBP19-201ENST00000517463 1124 ntBASIC4.97□□□□□ -1.61
CDX1P47902 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.97□□□□□ -1.61
CDX1P47902 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.97□□□□□ -1.61
CDX1P47902 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDX1P47902 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.97□□□□□ -1.61
CDX1P47902 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.97□□□□□ -1.61
CDX1P47902 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.97□□□□□ -1.61
CDX1P47902 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.97□□□□□ -1.61
CDX1P47902 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.97□□□□□ -1.61
CDX1P47902 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.97□□□□□ -1.61
CDX1P47902 AC026826.3-201ENST00000561747 158 ntBASIC4.97□□□□□ -1.61
CDX1P47902 AC002519.2-203ENST00000567043 837 ntBASIC4.97□□□□□ -1.61
CDX1P47902 AL078601.3-201ENST00000573303 535 ntBASIC4.97□□□□□ -1.61
CDX1P47902 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.97□□□□□ -1.61
CDX1P47902 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.97□□□□□ -1.61
CDX1P47902 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.97□□□□□ -1.61
CDX1P47902 OR4H6P-202ENST00000603819 340 ntBASIC4.97□□□□□ -1.61
CDX1P47902 uc_338.31-201ENST00000615595 186 ntBASIC4.97□□□□□ -1.61
CDX1P47902 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 AL356490.1-201ENST00000623079 479 ntBASIC4.97□□□□□ -1.61
CDX1P47902 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDX1P47902 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.97□□□□□ -1.61
CDX1P47902 AL683826.1-201ENST00000624104 627 ntBASIC4.97□□□□□ -1.61
CDX1P47902 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.97□□□□□ -1.61
CDX1P47902 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.97□□□□□ -1.61
CDX1P47902 AC111152.1-202ENST00000635848 339 ntBASIC4.97□□□□□ -1.61
CDX1P47902 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CDX1P47902 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CDX1P47902 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDX1P47902 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CDX1P47902 AC105235.1-201ENST00000623208 1816 ntBASIC4.97□□□□□ -1.61
CDX1P47902 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CDX1P47902 AC144833.1-201ENST00000567953 4089 ntBASIC4.97□□□□□ -1.61
CDX1P47902 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CDX1P47902 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDX1P47902 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.96□□□□□ -1.61
CDX1P47902 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CDX1P47902 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CDX1P47902 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CDX1P47902 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CDX1P47902 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CDX1P47902 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.61
CDX1P47902 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
CDX1P47902 AC114774.1-201ENST00000507410 1770 ntBASIC4.96□□□□□ -1.61
CDX1P47902 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CDX1P47902 AC018809.2-201ENST00000602436 3823 ntBASIC4.96□□□□□ -1.61
CDX1P47902 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.61
CDX1P47902 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CDX1P47902 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms