Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.39□□□□□ -1.39
BDNFP23560 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.39□□□□□ -1.39
BDNFP23560 AC090568.1-201ENST00000509499 856 ntBASIC6.39□□□□□ -1.39
BDNFP23560 BTG4P1-201ENST00000510421 183 ntBASIC6.39□□□□□ -1.39
BDNFP23560 AC114781.3-201ENST00000512083 142 ntBASIC6.39□□□□□ -1.39
BDNFP23560 MTCYBP19-201ENST00000517463 1124 ntBASIC6.39□□□□□ -1.39
BDNFP23560 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.39□□□□□ -1.39
BDNFP23560 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.39□□□□□ -1.39
BDNFP23560 OR4A40P-201ENST00000533878 948 ntBASIC6.39□□□□□ -1.39
BDNFP23560 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.39□□□□□ -1.39
BDNFP23560 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.39□□□□□ -1.39
BDNFP23560 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.39□□□□□ -1.39
BDNFP23560 AC092868.3-201ENST00000560515 784 ntBASIC6.39□□□□□ -1.39
BDNFP23560 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.39□□□□□ -1.39
BDNFP23560 AC068020.1-201ENST00000594215 661 ntBASIC6.39□□□□□ -1.39
BDNFP23560 AC130352.1-201ENST00000602979 661 ntBASIC6.39□□□□□ -1.39
BDNFP23560 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.39□□□□□ -1.39
BDNFP23560 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.39□□□□□ -1.39
BDNFP23560 AC004836.1-201ENST00000623032 634 ntBASIC6.39□□□□□ -1.39
BDNFP23560 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.39□□□□□ -1.39
BDNFP23560 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.39□□□□□ -1.39
BDNFP23560 AC129915.3-201ENST00000634128 948 ntBASIC6.39□□□□□ -1.39
BDNFP23560 RBPJP7-201ENST00000442803 1447 ntBASIC6.39□□□□□ -1.39
BDNFP23560 RBPJP5-201ENST00000449433 1447 ntBASIC6.39□□□□□ -1.39
BDNFP23560 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
BDNFP23560 SHQ1P1-201ENST00000437111 1544 ntBASIC6.39□□□□□ -1.39
BDNFP23560 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
BDNFP23560 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
BDNFP23560 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BDNFP23560 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
BDNFP23560 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BDNFP23560 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
BDNFP23560 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 GNL2P1-201ENST00000451274 2190 ntBASIC6.38□□□□□ -1.39
BDNFP23560 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.38□□□□□ -1.39
BDNFP23560 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 OR10R3P-201ENST00000361688 942 ntBASIC6.38□□□□□ -1.39
BDNFP23560 AMZ2P2-201ENST00000406819 1057 ntBASIC6.38□□□□□ -1.39
BDNFP23560 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 RPL35AP3-201ENST00000414680 288 ntBASIC6.38□□□□□ -1.39
BDNFP23560 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.38□□□□□ -1.39
BDNFP23560 NDUFA5P1-201ENST00000433858 341 ntBASIC6.38□□□□□ -1.39
BDNFP23560 MTND2P2-201ENST00000434633 945 ntBASIC6.38□□□□□ -1.39
BDNFP23560 SCAND3P1-201ENST00000439854 1060 ntBASIC6.38□□□□□ -1.39
BDNFP23560 RPL23AP60-201ENST00000450011 454 ntBASIC6.38□□□□□ -1.39
BDNFP23560 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 RN7SL269P-201ENST00000467795 305 ntBASIC6.38□□□□□ -1.39
BDNFP23560 AC083795.1-201ENST00000491760 320 ntBASIC6.38□□□□□ -1.39
BDNFP23560 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.38□□□□□ -1.39
BDNFP23560 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.38□□□□□ -1.39
BDNFP23560 AC067904.2-201ENST00000517322 1283 ntBASIC6.38□□□□□ -1.39
BDNFP23560 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.38□□□□□ -1.39
BDNFP23560 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.38□□□□□ -1.39
BDNFP23560 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.38□□□□□ -1.39
BDNFP23560 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.38□□□□□ -1.39
BDNFP23560 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.38□□□□□ -1.39
BDNFP23560 MIR6793-201ENST00000612376 63 ntBASIC6.38□□□□□ -1.39
BDNFP23560 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.38□□□□□ -1.39
BDNFP23560 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.38□□□□□ -1.39
BDNFP23560 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.38□□□□□ -1.39
BDNFP23560 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.38□□□□□ -1.39
BDNFP23560 AC006511.3-201ENST00000624929 1783 ntBASIC6.38□□□□□ -1.39
BDNFP23560 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.38□□□□□ -1.39
BDNFP23560 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.38□□□□□ -1.39
BDNFP23560 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BDNFP23560 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
BDNFP23560 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
BDNFP23560 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.37□□□□□ -1.39
BDNFP23560 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
BDNFP23560 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BDNFP23560 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BDNFP23560 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BDNFP23560 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
BDNFP23560 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.37□□□□□ -1.39
BDNFP23560 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.37□□□□□ -1.39
BDNFP23560 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BDNFP23560 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BDNFP23560 AL592429.1-201ENST00000403909 1473 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms