Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL1P22362 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.81□□□□□ -1.64
CCL1P22362 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.81□□□□□ -1.64
CCL1P22362 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL1P22362 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL1P22362 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CCL1P22362 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL1P22362 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL1P22362 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCL1P22362 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL1P22362 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL1P22362 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCL1P22362 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL1P22362 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL1P22362 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.8□□□□□ -1.64
CCL1P22362 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL1P22362 AC104964.3-201ENST00000606115 2860 ntBASIC4.8□□□□□ -1.64
CCL1P22362 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL1P22362 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL1P22362 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL1P22362 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL1P22362 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCL1P22362 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL1P22362 RNA5SP131-201ENST00000365452 119 ntBASIC4.8□□□□□ -1.64
CCL1P22362 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL1P22362 RPSAP35-201ENST00000413753 818 ntBASIC4.8□□□□□ -1.64
CCL1P22362 HMGB3P24-201ENST00000433260 622 ntBASIC4.8□□□□□ -1.64
CCL1P22362 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL1P22362 REG1CP-206ENST00000447469 496 ntBASIC4.8□□□□□ -1.64
CCL1P22362 CTSLP6-201ENST00000458273 1002 ntBASIC4.8□□□□□ -1.64
CCL1P22362 UBFD1P1-201ENST00000473259 814 ntBASIC4.8□□□□□ -1.64
CCL1P22362 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL1P22362 AP000797.2-201ENST00000475768 606 ntBASIC4.8□□□□□ -1.64
CCL1P22362 AC087672.1-201ENST00000479876 766 ntBASIC4.8□□□□□ -1.64
CCL1P22362 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCL1P22362 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL1P22362 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.8□□□□□ -1.64
CCL1P22362 SNORA70.20-201ENST00000516848 126 ntBASIC4.8□□□□□ -1.64
CCL1P22362 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL1P22362 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL1P22362 AC068305.2-201ENST00000550567 1205 ntBASIC4.8□□□□□ -1.64
CCL1P22362 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL1P22362 HMGN2P47-201ENST00000559378 272 ntBASIC4.8□□□□□ -1.64
CCL1P22362 MIR744-201ENST00000578242 98 ntBASIC4.8□□□□□ -1.64
CCL1P22362 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL1P22362 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL1P22362 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL1P22362 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.8□□□□□ -1.64
CCL1P22362 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCL1P22362 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.8□□□□□ -1.64
CCL1P22362 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL1P22362 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL1P22362 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCL1P22362 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.8□□□□□ -1.64
CCL1P22362 AP000432.2-201ENST00000624164 2048 ntBASIC4.8□□□□□ -1.64
CCL1P22362 Z83820.1-201ENST00000456978 1499 ntBASIC4.8□□□□□ -1.64
CCL1P22362 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
CCL1P22362 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CCL1P22362 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCL1P22362 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CCL1P22362 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCL1P22362 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CCL1P22362 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CCL1P22362 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCL1P22362 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.79□□□□□ -1.64
CCL1P22362 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CCL1P22362 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL1P22362 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CCL1P22362 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL1P22362 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 SNORA48.4-201ENST00000391089 134 ntBASIC4.79□□□□□ -1.64
CCL1P22362 AC004386.1-201ENST00000393214 761 ntBASIC4.79□□□□□ -1.64
CCL1P22362 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL1P22362 AC069154.1-201ENST00000432914 542 ntBASIC4.79□□□□□ -1.64
CCL1P22362 AC016772.1-201ENST00000444170 1261 ntBASIC4.79□□□□□ -1.64
CCL1P22362 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL1P22362 AC090602.1-201ENST00000469695 252 ntBASIC4.79□□□□□ -1.64
CCL1P22362 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.79□□□□□ -1.64
CCL1P22362 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL1P22362 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.79□□□□□ -1.64
CCL1P22362 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.79□□□□□ -1.64
CCL1P22362 AC015802.2-201ENST00000589690 189 ntBASIC4.79□□□□□ -1.64
CCL1P22362 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL1P22362 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.79□□□□□ -1.64
CCL1P22362 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.79□□□□□ -1.64
CCL1P22362 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCL1P22362 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCL1P22362 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCL1P22362 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms