Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
COL5A1P20908 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC5.39□□□□□ -1.55
COL5A1P20908 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 AC009831.5-201ENST00000624000 3189 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 MAPK10-304ENST00000641341 3984 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.39□□□□□ -1.55
COL5A1P20908 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 AC232271.1-201ENST00000602455 2715 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL5A1P20908 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 DUTP5-201ENST00000406790 469 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.39□□□□□ -1.55
COL5A1P20908 PA2G4P6-201ENST00000438325 1197 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 AL390879.1-201ENST00000439143 386 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 RPL12P39-201ENST00000455456 496 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 RPS23P2-201ENST00000463671 415 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 RN7SKP248-201ENST00000516278 305 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.39□□□□□ -1.55
COL5A1P20908 AC137768.1-201ENST00000549998 553 ntBASIC5.39□□□□□ -1.55
COL5A1P20908 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A1P20908 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A1P20908 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.38□□□□□ -1.55
COL5A1P20908 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.38□□□□□ -1.55
COL5A1P20908 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.38□□□□□ -1.55
COL5A1P20908 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
COL5A1P20908 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.38□□□□□ -1.55
COL5A1P20908 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.38□□□□□ -1.55
COL5A1P20908 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
COL5A1P20908 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.38□□□□□ -1.55
COL5A1P20908 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.38□□□□□ -1.55
COL5A1P20908 AC007161.1-204ENST00000423039 460 ntBASIC5.38□□□□□ -1.55
COL5A1P20908 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.38□□□□□ -1.55
COL5A1P20908 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.38□□□□□ -1.55
COL5A1P20908 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.38□□□□□ -1.55
COL5A1P20908 AC083899.1-201ENST00000454465 3819 ntBASIC5.38□□□□□ -1.55
COL5A1P20908 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
COL5A1P20908 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.38□□□□□ -1.55
COL5A1P20908 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.38□□□□□ -1.55
COL5A1P20908 IGLV3-24-201ENST00000517477 197 ntBASIC5.38□□□□□ -1.55
COL5A1P20908 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.38□□□□□ -1.55
COL5A1P20908 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.38□□□□□ -1.55
COL5A1P20908 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.38□□□□□ -1.55
COL5A1P20908 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL5A1P20908 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL5A1P20908 NANOGP3-201ENST00000605855 286 ntBASIC5.38□□□□□ -1.55
COL5A1P20908 AC109583.2-201ENST00000617367 129 ntBASIC5.38□□□□□ -1.55
COL5A1P20908 AL034549.2-201ENST00000618285 3373 ntBASIC5.38□□□□□ -1.55
COL5A1P20908 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
COL5A1P20908 AC022164.1-201ENST00000568767 2673 ntBASIC5.38□□□□□ -1.55
COL5A1P20908 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.38□□□□□ -1.55
COL5A1P20908 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.38□□□□□ -1.55
COL5A1P20908 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A1P20908 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC5.37□□□□□ -1.55
COL5A1P20908 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL5A1P20908 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.37□□□□□ -1.55
COL5A1P20908 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.37□□□□□ -1.55
COL5A1P20908 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL5A1P20908 MFSD8-239ENST00000641590 2479 ntBASIC5.37□□□□□ -1.55
COL5A1P20908 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.37□□□□□ -1.55
COL5A1P20908 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL5A1P20908 ZNF733P-202ENST00000444809 1573 ntBASIC5.37□□□□□ -1.55
COL5A1P20908 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.37□□□□□ -1.55
COL5A1P20908 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL5A1P20908 RNA5SP305-201ENST00000362665 119 ntBASIC5.37□□□□□ -1.55
COL5A1P20908 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms