Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
XRCC1P18887 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
XRCC1P18887 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
XRCC1P18887 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
XRCC1P18887 TMSB4XP4-201ENST00000323496 618 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
XRCC1P18887 RN7SKP81-201ENST00000365603 331 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.71□□□□□ -1.5
XRCC1P18887 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
XRCC1P18887 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
XRCC1P18887 RN7SKP206-201ENST00000410823 293 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 RN7SKP29-201ENST00000410957 272 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.71□□□□□ -1.5
XRCC1P18887 DEFA9P-201ENST00000433042 285 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 RPS12P17-201ENST00000438591 377 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 AL161636.2-201ENST00000445179 927 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 HMGN1P36-201ENST00000446623 298 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 RPS27AP2-201ENST00000457576 465 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 AL603882.1-201ENST00000463059 681 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 RN7SL273P-201ENST00000481561 299 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 NENFP3-201ENST00000503735 313 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 USP9YP2-201ENST00000504503 1000 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 USP9YP1-201ENST00000513521 1002 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 RNU6-964P-201ENST00000516524 69 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.71□□□□□ -1.5
XRCC1P18887 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.71□□□□□ -1.5
XRCC1P18887 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.71□□□□□ -1.5
XRCC1P18887 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
XRCC1P18887 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.71□□□□□ -1.5
XRCC1P18887 GARSP1-201ENST00000570895 719 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 TXNP4-201ENST00000575018 310 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.71□□□□□ -1.5
XRCC1P18887 AC126175.1-201ENST00000617041 758 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.71□□□□□ -1.5
XRCC1P18887 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.71□□□□□ -1.5
XRCC1P18887 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
XRCC1P18887 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
XRCC1P18887 AL158152.1-201ENST00000602652 1435 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
XRCC1P18887 AL161912.4-201ENST00000623889 2468 ntBASIC5.71□□□□□ -1.5
XRCC1P18887 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
XRCC1P18887 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
XRCC1P18887 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRCC1P18887 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.7□□□□□ -1.5
XRCC1P18887 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.7□□□□□ -1.5
XRCC1P18887 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRCC1P18887 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
XRCC1P18887 AL591135.1-201ENST00000401578 5914 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 U3.23-201ENST00000391132 200 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 RNA5SP178-201ENST00000410380 128 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 MRPL53P1-201ENST00000414323 319 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.7□□□□□ -1.5
XRCC1P18887 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.7□□□□□ -1.5
XRCC1P18887 AC093155.2-201ENST00000420734 937 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 RPS27AP6-201ENST00000427962 448 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 AC023141.8-201ENST00000442554 208 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 RPS23P9-201ENST00000448848 438 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 AC012123.2-201ENST00000485809 248 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 TMEM97P2-201ENST00000517841 403 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 AC021733.2-201ENST00000518830 497 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.7□□□□□ -1.5
XRCC1P18887 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.7□□□□□ -1.5
XRCC1P18887 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 MIR4260-201ENST00000583107 67 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 AL133481.2-203ENST00000607558 139 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 AC015712.7-201ENST00000615211 635 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.7□□□□□ -1.5
XRCC1P18887 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.7□□□□□ -1.5
XRCC1P18887 MIR4302-201ENST00000638058 60 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.7□□□□□ -1.5
XRCC1P18887 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.7□□□□□ -1.5
XRCC1P18887 MIR193BHG-214ENST00000641765 509 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRCC1P18887 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
XRCC1P18887 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 AL137058.3-201ENST00000624531 3099 ntBASIC5.7□□□□□ -1.5
XRCC1P18887 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRCC1P18887 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.7□□□□□ -1.5
XRCC1P18887 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
XRCC1P18887 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
XRCC1P18887 AL121839.2-201ENST00000565058 6943 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.69□□□□□ -1.5
XRCC1P18887 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.69□□□□□ -1.5
XRCC1P18887 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.69□□□□□ -1.5
XRCC1P18887 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
XRCC1P18887 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
XRCC1P18887 RN7SKP185-201ENST00000362813 326 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 MIR323B-201ENST00000385269 82 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AL512422.1-201ENST00000407033 553 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.69□□□□□ -1.5
XRCC1P18887 AC117434.1-201ENST00000419971 836 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms