Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 MTCO2P3-201ENST00000442543 421 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 GAPDHP20-201ENST00000444107 1007 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.51□□□□□ -1.37
COL6A2P12110 PTENP1-201ENST00000447117 1215 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC6.51□□□□□ -1.37
COL6A2P12110 TVP23CP1-201ENST00000450317 639 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 TUBBP11-201ENST00000472255 252 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 RN7SL776P-201ENST00000493390 268 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.51□□□□□ -1.37
COL6A2P12110 AC091965.3-201ENST00000506236 208 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 RN7SKP141-201ENST00000516167 338 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 RNA5SP75-201ENST00000516841 111 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 SNORA81.2-201ENST00000516868 170 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AC103855.4-201ENST00000533158 265 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 AC073916.1-201ENST00000545095 130 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AC069240.2-201ENST00000550242 609 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 NDUFA5P11-201ENST00000567995 343 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.51□□□□□ -1.37
COL6A2P12110 AP001094.1-201ENST00000579805 193 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AC012254.4-201ENST00000588843 273 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AL020997.3-201ENST00000602843 359 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 HIRAP1-201ENST00000605318 787 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AC093635.1-201ENST00000609028 555 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 HULC.1-201ENST00000612720 240 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AC026124.2-201ENST00000621847 656 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.51□□□□□ -1.37
COL6A2P12110 AP000550.3-201ENST00000637734 379 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 AC103706.2-201ENST00000638080 240 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 AC007342.7-201ENST00000624610 2337 ntBASIC6.51□□□□□ -1.37
COL6A2P12110 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
COL6A2P12110 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
COL6A2P12110 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.51□□□□□ -1.37
COL6A2P12110 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL6A2P12110 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.5□□□□□ -1.37
COL6A2P12110 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.5□□□□□ -1.37
COL6A2P12110 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 RN7SKP149-201ENST00000363008 344 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 SNORA38B-201ENST00000363524 131 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 Y_RNA.201-201ENST00000364052 96 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL6A2P12110 Y_RNA.578-201ENST00000390903 88 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AL138880.1-201ENST00000405824 642 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL6A2P12110 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.5□□□□□ -1.37
COL6A2P12110 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 RPL23AP85-201ENST00000421838 433 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 ETF1P3-201ENST00000430422 1160 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 NDUFA5P10-201ENST00000432147 357 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 ARL4AP3-201ENST00000441452 574 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 AL157827.1-201ENST00000447622 132 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 VN1R38P-201ENST00000450265 887 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC073387.1-201ENST00000453261 709 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 MTCO3P16-201ENST00000454456 754 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 OR2AF1P-201ENST00000454899 889 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 RPL7P32-201ENST00000457119 744 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AC002075.1-201ENST00000457396 676 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 USP9YP25-201ENST00000457708 443 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC018639.1-201ENST00000492994 442 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 NPM1P27-201ENST00000502784 830 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AC091951.3-201ENST00000504093 246 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 AC010409.2-201ENST00000505780 478 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC6.5□□□□□ -1.37
COL6A2P12110 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.5□□□□□ -1.37
COL6A2P12110 RPL7L1P7-201ENST00000509986 724 ntBASIC6.5□□□□□ -1.37
COL6A2P12110 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms