Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 OR5W1P-201ENST00000423705 938 ntBASIC6.69□□□□□ -1.34
TOP1P11387 CRIP1P1-201ENST00000427567 185 ntBASIC6.69□□□□□ -1.34
TOP1P11387 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.69□□□□□ -1.34
TOP1P11387 AC009963.4-201ENST00000448535 339 ntBASIC6.69□□□□□ -1.34
TOP1P11387 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.69□□□□□ -1.34
TOP1P11387 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.69□□□□□ -1.34
TOP1P11387 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.69□□□□□ -1.34
TOP1P11387 RPSAP39-201ENST00000467439 883 ntBASIC6.69□□□□□ -1.34
TOP1P11387 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.69□□□□□ -1.34
TOP1P11387 AC136777.2-201ENST00000522979 358 ntBASIC6.69□□□□□ -1.34
TOP1P11387 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.69□□□□□ -1.34
TOP1P11387 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.69□□□□□ -1.34
TOP1P11387 RN7SL753P-201ENST00000581238 290 ntBASIC6.69□□□□□ -1.34
TOP1P11387 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.69□□□□□ -1.34
TOP1P11387 AC025857.2-201ENST00000602711 238 ntBASIC6.69□□□□□ -1.34
TOP1P11387 FAM72A-208ENST00000607379 1139 ntBASIC6.69□□□□□ -1.34
TOP1P11387 CU639417.4-201ENST00000623928 207 ntBASIC6.69□□□□□ -1.34
TOP1P11387 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.69□□□□□ -1.34
TOP1P11387 AL034546.1-201ENST00000623740 3693 ntBASIC6.69□□□□□ -1.34
TOP1P11387 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.69□□□□□ -1.34
TOP1P11387 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TOP1P11387 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TOP1P11387 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
TOP1P11387 AC027279.1-201ENST00000568885 4284 ntBASIC6.69□□□□□ -1.34
TOP1P11387 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.69□□□□□ -1.34
TOP1P11387 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.69□□□□□ -1.34
TOP1P11387 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOP1P11387 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TOP1P11387 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
TOP1P11387 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOP1P11387 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TOP1P11387 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TOP1P11387 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOP1P11387 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOP1P11387 RNA5SP131-201ENST00000365452 119 ntBASIC6.68□□□□□ -1.34
TOP1P11387 MIR130A-201ENST00000385274 89 ntBASIC6.68□□□□□ -1.34
TOP1P11387 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
TOP1P11387 RMRPP5-201ENST00000411156 267 ntBASIC6.68□□□□□ -1.34
TOP1P11387 AC113412.1-201ENST00000425840 504 ntBASIC6.68□□□□□ -1.34
TOP1P11387 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.68□□□□□ -1.34
TOP1P11387 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.68□□□□□ -1.34
TOP1P11387 RSU1P1-201ENST00000453416 441 ntBASIC6.68□□□□□ -1.34
TOP1P11387 OR2AF1P-201ENST00000454899 889 ntBASIC6.68□□□□□ -1.34
TOP1P11387 RPS23P2-201ENST00000463671 415 ntBASIC6.68□□□□□ -1.34
TOP1P11387 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.68□□□□□ -1.34
TOP1P11387 AC087672.1-201ENST00000479876 766 ntBASIC6.68□□□□□ -1.34
TOP1P11387 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.68□□□□□ -1.34
TOP1P11387 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.68□□□□□ -1.34
TOP1P11387 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.68□□□□□ -1.34
TOP1P11387 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.68□□□□□ -1.34
TOP1P11387 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.68□□□□□ -1.34
TOP1P11387 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.68□□□□□ -1.34
TOP1P11387 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.68□□□□□ -1.34
TOP1P11387 HSPE1P2-201ENST00000554777 306 ntBASIC6.68□□□□□ -1.34
TOP1P11387 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.68□□□□□ -1.34
TOP1P11387 FO393422.1-201ENST00000603908 708 ntBASIC6.68□□□□□ -1.34
TOP1P11387 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.68□□□□□ -1.34
TOP1P11387 AC004477.3-201ENST00000614061 590 ntBASIC6.68□□□□□ -1.34
TOP1P11387 AC090607.5-201ENST00000615692 224 ntBASIC6.68□□□□□ -1.34
TOP1P11387 AL390318.1-201ENST00000624564 687 ntBASIC6.68□□□□□ -1.34
TOP1P11387 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TOP1P11387 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
TOP1P11387 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TOP1P11387 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOP1P11387 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
TOP1P11387 YES1P1-201ENST00000418510 1628 ntBASIC6.68□□□□□ -1.34
TOP1P11387 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOP1P11387 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.68□□□□□ -1.34
TOP1P11387 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
TOP1P11387 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOP1P11387 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
TOP1P11387 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
TOP1P11387 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TOP1P11387 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TOP1P11387 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TOP1P11387 LINC02019-201ENST00000608605 2060 ntBASIC6.67□□□□□ -1.34
TOP1P11387 NCOA4P2-201ENST00000340589 1813 ntBASIC6.67□□□□□ -1.34
TOP1P11387 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TOP1P11387 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TOP1P11387 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.67□□□□□ -1.34
TOP1P11387 RNA5SP30-201ENST00000365552 115 ntBASIC6.67□□□□□ -1.34
TOP1P11387 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.67□□□□□ -1.34
TOP1P11387 VN1R21P-201ENST00000426703 765 ntBASIC6.67□□□□□ -1.34
TOP1P11387 AC073909.1-201ENST00000447112 999 ntBASIC6.67□□□□□ -1.34
TOP1P11387 RN7SL72P-201ENST00000460697 269 ntBASIC6.67□□□□□ -1.34
TOP1P11387 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TOP1P11387 DUTP1-201ENST00000493631 470 ntBASIC6.67□□□□□ -1.34
TOP1P11387 RN7SL284P-201ENST00000498823 275 ntBASIC6.67□□□□□ -1.34
TOP1P11387 RNU6-964P-201ENST00000516524 69 ntBASIC6.67□□□□□ -1.34
TOP1P11387 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.67□□□□□ -1.34
TOP1P11387 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TOP1P11387 AL049872.1-201ENST00000556323 322 ntBASIC6.67□□□□□ -1.34
TOP1P11387 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.67□□□□□ -1.34
TOP1P11387 AL513327.3-201ENST00000602618 469 ntBASIC6.67□□□□□ -1.34
TOP1P11387 AC104695.2-201ENST00000605056 775 ntBASIC6.67□□□□□ -1.34
TOP1P11387 AC008115.3-201ENST00000614874 549 ntBASIC6.67□□□□□ -1.34
TOP1P11387 AC007683.2-201ENST00000624681 714 ntBASIC6.67□□□□□ -1.34
TOP1P11387 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
TOP1P11387 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
TOP1P11387 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms