Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AL359885.1-201ENST00000415786 903 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AL645936.1-201ENST00000441979 518 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AL162739.1-201ENST00000450606 307 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 CBX1P2-201ENST00000453841 458 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC073594.1-201ENST00000462065 364 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 OR7E22P-201ENST00000478335 1035 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC095052.1-201ENST00000509955 863 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC127381.1-201ENST00000555979 939 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC020916.2-201ENST00000591242 360 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 RPSAP75-201ENST00000605848 301 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AL591167.1-201ENST00000607321 456 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AL135999.3-201ENST00000610501 812 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 MIR6889-201ENST00000613185 59 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC093591.2-201ENST00000565254 3843 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 OR56A4-201ENST00000330728 1209 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 MIR7-1-201ENST00000384871 110 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC211486.3-201ENST00000412694 621 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 MTATP6P19-201ENST00000413797 659 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC242426.1-201ENST00000435270 960 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC010086.1-201ENST00000437359 1052 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 GAPDHP23-201ENST00000444823 993 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 HIGD1AP16-201ENST00000450986 258 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 RAB28P2-201ENST00000454299 641 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 TPT1P1-201ENST00000458495 518 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 RN7SL362P-201ENST00000494228 267 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AL117692.1-201ENST00000494283 713 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 SNX18P24-201ENST00000505249 671 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 ENPP7P11-201ENST00000505915 627 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 SNX18P25-201ENST00000510539 758 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC117525.1-201ENST00000515228 503 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 Y_RNA.710-201ENST00000516975 110 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 OR6M2P-201ENST00000529831 871 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 NPIPB14P-203ENST00000532298 987 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AL078601.3-201ENST00000573303 535 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC005828.7-201ENST00000607331 556 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.66□□□□□ -1.5
LINGO3P0C6S8 AC011933.2-201ENST00000578539 2790 ntBASIC5.66□□□□□ -1.5
LINGO3P0C6S8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LINGO3P0C6S8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.65□□□□□ -1.5
LINGO3P0C6S8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
LINGO3P0C6S8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LINGO3P0C6S8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LINGO3P0C6S8 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LINGO3P0C6S8 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LINGO3P0C6S8 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LINGO3P0C6S8 RN7SKP171-201ENST00000364417 303 ntBASIC5.65□□□□□ -1.5
LINGO3P0C6S8 RNA5SP279-201ENST00000365513 117 ntBASIC5.65□□□□□ -1.5
LINGO3P0C6S8 RN7SKP86-201ENST00000410454 332 ntBASIC5.65□□□□□ -1.5
LINGO3P0C6S8 NPM1P40-201ENST00000412758 733 ntBASIC5.65□□□□□ -1.5
LINGO3P0C6S8 AC245096.1-201ENST00000413104 546 ntBASIC5.65□□□□□ -1.5
LINGO3P0C6S8 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms