Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HOXC6P09630 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
HOXC6P09630 AC068733.2-201ENST00000605434 1418 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC6P09630 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
HOXC6P09630 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXC6P09630 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC6P09630 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC6P09630 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC6P09630 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC6P09630 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC6P09630 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
HOXC6P09630 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HOXC6P09630 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC6P09630 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC6P09630 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC6P09630 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HOXC6P09630 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC6P09630 ZNF812P-201ENST00000457674 1694 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 METTL15P3-201ENST00000415522 1221 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 UBE2V2P3-201ENST00000433562 437 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 OR52B5P-201ENST00000435337 951 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 RPS26P41-201ENST00000450370 284 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC6P09630 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC6P09630 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC6P09630 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC6P09630 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC6P09630 SETP3-201ENST00000581726 813 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC6P09630 AC026790.2-201ENST00000606282 430 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 AL445222.1-201ENST00000607259 628 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 AL121612.2-201ENST00000612261 482 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC6P09630 OR52B5P-202ENST00000641118 1110 ntBASIC6.47□□□□□ -1.37
HOXC6P09630 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HOXC6P09630 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC6P09630 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC6P09630 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC6P09630 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC6P09630 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
HOXC6P09630 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.46□□□□□ -1.37
HOXC6P09630 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.46□□□□□ -1.37
HOXC6P09630 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
HOXC6P09630 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
HOXC6P09630 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC6P09630 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC6P09630 HSPD1P8-201ENST00000400121 1658 ntBASIC6.46□□□□□ -1.37
HOXC6P09630 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.37
HOXC6P09630 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC6P09630 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
HOXC6P09630 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
HOXC6P09630 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC6P09630 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC6P09630 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC6P09630 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC6P09630 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXC6P09630 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 RNA5SP251-201ENST00000410614 137 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 AC019070.1-201ENST00000415008 1024 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC6P09630 AC005033.1-201ENST00000428904 813 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 VDAC2P4-201ENST00000452925 711 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 CBX1P5-201ENST00000475330 559 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 RNU6-551P-201ENST00000516661 103 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.46□□□□□ -1.38
HOXC6P09630 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC6P09630 AC244502.2-201ENST00000543361 851 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC6P09630 AC126177.5-201ENST00000549599 178 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 DPPA3P2-201ENST00000553589 478 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 RN7SL708P-201ENST00000580952 299 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 AC090607.5-201ENST00000615692 224 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 WBP1LP8-201ENST00000617401 327 ntBASIC6.46□□□□□ -1.38
HOXC6P09630 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC6P09630 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HOXC6P09630 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC6P09630 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC6P09630 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC6P09630 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HOXC6P09630 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC6P09630 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC6P09630 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC6P09630 MFSD8-219ENST00000641228 2559 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HOXC6P09630 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HOXC6P09630 AC005294.1-201ENST00000355509 281 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 U8.4-201ENST00000363626 134 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC6P09630 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC6P09630 MIR585-201ENST00000384887 94 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 MIR765-201ENST00000390226 114 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 AL390774.1-201ENST00000411924 246 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms