Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.3□□□□□ -1.72
CXCL1P09341 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL1P09341 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.3□□□□□ -1.72
CXCL1P09341 OR5M12P-201ENST00000423388 929 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL1P09341 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CXCL1P09341 AC092447.2-201ENST00000435487 669 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 AL158214.1-201ENST00000444423 404 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.3□□□□□ -1.72
CXCL1P09341 RPL31P11-202ENST00000454082 372 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.3□□□□□ -1.72
CXCL1P09341 RN7SL655P-201ENST00000486087 298 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL1P09341 AC008868.1-201ENST00000509786 737 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 IMPA1P1-201ENST00000510718 842 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.3□□□□□ -1.72
CXCL1P09341 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.3□□□□□ -1.72
CXCL1P09341 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.3□□□□□ -1.72
CXCL1P09341 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.3□□□□□ -1.72
CXCL1P09341 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.3□□□□□ -1.72
CXCL1P09341 AC006349.1-201ENST00000555526 235 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 RN7SL32P-201ENST00000580514 281 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.3□□□□□ -1.72
CXCL1P09341 AC009237.13-201ENST00000603193 276 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 AC145423.1-201ENST00000605712 336 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 AC139792.1-201ENST00000607051 647 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 AL008582.1-201ENST00000609612 442 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 MIR6849-201ENST00000618543 69 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 AL357562.1-201ENST00000624911 609 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL1P09341 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL1P09341 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CXCL1P09341 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL1P09341 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CXCL1P09341 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 RBPJP2-201ENST00000618187 1444 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL1P09341 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL1P09341 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL1P09341 AC117409.1-201ENST00000470499 1310 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CXCL1P09341 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL1P09341 SOCS5P3-201ENST00000425115 1576 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL1P09341 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CXCL1P09341 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CXCL1P09341 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL1P09341 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.29□□□□□ -1.72
CXCL1P09341 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CXCL1P09341 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.29□□□□□ -1.72
CXCL1P09341 PPIAP9-201ENST00000403866 498 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.29□□□□□ -1.72
CXCL1P09341 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.29□□□□□ -1.72
CXCL1P09341 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.29□□□□□ -1.72
CXCL1P09341 RPS4XP5-201ENST00000419038 768 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 CLCN3P1-201ENST00000423965 1017 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 NPM1P22-201ENST00000427761 952 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 TMEM183AP1-205ENST00000432739 290 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CXCL1P09341 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.29□□□□□ -1.72
CXCL1P09341 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.29□□□□□ -1.72
CXCL1P09341 AL590004.3-202ENST00000445883 451 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL1P09341 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 AC092865.4-201ENST00000477936 615 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
CXCL1P09341 AC091912.1-201ENST00000511351 248 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AC138938.1-201ENST00000515431 782 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL1P09341 OR10D4P-201ENST00000525892 951 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 BNIP3P1-201ENST00000547295 580 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 AC091304.5-201ENST00000568969 158 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AC006120.1-201ENST00000579375 546 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 OR7E19P-202ENST00000589942 844 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.29□□□□□ -1.72
CXCL1P09341 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.29□□□□□ -1.72
CXCL1P09341 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.29□□□□□ -1.72
CXCL1P09341 AC068768.2-201ENST00000602352 343 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AC036176.3-201ENST00000602456 418 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AL512430.4-201ENST00000603085 613 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 AC023206.1-201ENST00000605824 298 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AL139099.4-201ENST00000614802 114 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 AL122125.1-201ENST00000616999 600 ntBASIC4.29□□□□□ -1.72
CXCL1P09341 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms