Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6□□□□□ -1.45
APOEP02649 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6□□□□□ -1.45
APOEP02649 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6□□□□□ -1.45
APOEP02649 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6□□□□□ -1.45
APOEP02649 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6□□□□□ -1.45
APOEP02649 OR7E116P-201ENST00000448529 957 ntBASIC6□□□□□ -1.45
APOEP02649 RPL31P15-201ENST00000449770 338 ntBASIC6□□□□□ -1.45
APOEP02649 FRG2FP-204ENST00000453982 852 ntBASIC6□□□□□ -1.45
APOEP02649 UBFD1P1-201ENST00000473259 814 ntBASIC6□□□□□ -1.45
APOEP02649 PDCL3P4-201ENST00000489621 720 ntBASIC6□□□□□ -1.45
APOEP02649 AC074255.1-201ENST00000511259 501 ntBASIC6□□□□□ -1.45
APOEP02649 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6□□□□□ -1.45
APOEP02649 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
APOEP02649 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6□□□□□ -1.45
APOEP02649 MRO-208ENST00000588444 866 ntTSL 3 BASIC6□□□□□ -1.45
APOEP02649 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
APOEP02649 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6□□□□□ -1.45
APOEP02649 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6□□□□□ -1.45
APOEP02649 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6□□□□□ -1.45
APOEP02649 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6□□□□□ -1.45
APOEP02649 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 AL158152.1-201ENST00000602652 1435 ntBASIC5.99□□□□□ -1.45
APOEP02649 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.99□□□□□ -1.45
APOEP02649 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.99□□□□□ -1.45
APOEP02649 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
APOEP02649 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 AL078595.2-201ENST00000605309 1780 ntBASIC5.99□□□□□ -1.45
APOEP02649 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.99□□□□□ -1.45
APOEP02649 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
APOEP02649 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.99□□□□□ -1.45
APOEP02649 AC127526.2-201ENST00000426436 775 ntBASIC5.99□□□□□ -1.45
APOEP02649 MTND6P12-201ENST00000428247 522 ntBASIC5.99□□□□□ -1.45
APOEP02649 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.99□□□□□ -1.45
APOEP02649 AL389925.1-201ENST00000432257 728 ntBASIC5.99□□□□□ -1.45
APOEP02649 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.99□□□□□ -1.45
APOEP02649 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.99□□□□□ -1.45
APOEP02649 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.99□□□□□ -1.45
APOEP02649 MEMO1P4-201ENST00000453590 386 ntBASIC5.99□□□□□ -1.45
APOEP02649 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.99□□□□□ -1.45
APOEP02649 RPS17P15-201ENST00000475609 349 ntBASIC5.99□□□□□ -1.45
APOEP02649 OR7E157P-201ENST00000494376 911 ntBASIC5.99□□□□□ -1.45
APOEP02649 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 CYCSP22-201ENST00000517555 339 ntBASIC5.99□□□□□ -1.45
APOEP02649 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.99□□□□□ -1.45
APOEP02649 AC126615.2-201ENST00000553003 515 ntBASIC5.99□□□□□ -1.45
APOEP02649 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.99□□□□□ -1.45
APOEP02649 RN7SL544P-201ENST00000617232 284 ntBASIC5.99□□□□□ -1.45
APOEP02649 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 AL357153.4-201ENST00000620487 1016 ntBASIC5.99□□□□□ -1.45
APOEP02649 RN7SL763P-201ENST00000620922 284 ntBASIC5.99□□□□□ -1.45
APOEP02649 AC022919.1-201ENST00000624979 626 ntBASIC5.99□□□□□ -1.45
APOEP02649 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
APOEP02649 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 AC068870.3-201ENST00000625077 2536 ntBASIC5.99□□□□□ -1.45
APOEP02649 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.99□□□□□ -1.45
APOEP02649 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOEP02649 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.98□□□□□ -1.45
APOEP02649 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
APOEP02649 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
APOEP02649 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.98□□□□□ -1.45
APOEP02649 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
APOEP02649 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
APOEP02649 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
APOEP02649 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
APOEP02649 CASC19-260ENST00000641828 2001 ntBASIC5.98□□□□□ -1.45
APOEP02649 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
APOEP02649 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
APOEP02649 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
APOEP02649 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
APOEP02649 RN7SKP78-201ENST00000364711 318 ntBASIC5.98□□□□□ -1.45
APOEP02649 RN7SKP292-201ENST00000365522 317 ntBASIC5.98□□□□□ -1.45
APOEP02649 AL031985.1-201ENST00000392713 418 ntBASIC5.98□□□□□ -1.45
APOEP02649 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.98□□□□□ -1.45
APOEP02649 OR2AT2P-201ENST00000413438 905 ntBASIC5.98□□□□□ -1.45
APOEP02649 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.98□□□□□ -1.45
APOEP02649 RPL34P3-201ENST00000421454 338 ntBASIC5.98□□□□□ -1.45
APOEP02649 VN1R21P-201ENST00000426703 765 ntBASIC5.98□□□□□ -1.45
APOEP02649 CRIP1P1-201ENST00000427567 185 ntBASIC5.98□□□□□ -1.45
APOEP02649 HMGB3P24-201ENST00000433260 622 ntBASIC5.98□□□□□ -1.45
APOEP02649 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.98□□□□□ -1.45
APOEP02649 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.98□□□□□ -1.45
APOEP02649 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.98□□□□□ -1.45
APOEP02649 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.98□□□□□ -1.45
APOEP02649 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
APOEP02649 RN7SL570P-201ENST00000484405 292 ntBASIC5.98□□□□□ -1.45
APOEP02649 RPL32P33-201ENST00000487023 394 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms