Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 AC130360.2-201ENST00000533477 1556 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.87□□□□□ -1.31
MBD4O95243 Z83820.1-201ENST00000456978 1499 ntBASIC6.87□□□□□ -1.31
MBD4O95243 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.87□□□□□ -1.31
MBD4O95243 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.87□□□□□ -1.31
MBD4O95243 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.87□□□□□ -1.31
MBD4O95243 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 AC005261.6-201ENST00000623072 1387 ntBASIC6.87□□□□□ -1.31
MBD4O95243 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
MBD4O95243 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.87□□□□□ -1.31
MBD4O95243 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 RNA5SP46-201ENST00000362370 120 ntBASIC6.87□□□□□ -1.31
MBD4O95243 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 MIR130A-201ENST00000385274 89 ntBASIC6.87□□□□□ -1.31
MBD4O95243 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.87□□□□□ -1.31
MBD4O95243 SDHDP6-201ENST00000414693 480 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.87□□□□□ -1.31
MBD4O95243 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 AC073410.1-201ENST00000435125 589 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 AC002504.1-201ENST00000438281 691 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AC007386.1-201ENST00000455212 582 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AC023141.9-201ENST00000458734 412 ntBASIC6.87□□□□□ -1.31
MBD4O95243 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 RN7SL717P-201ENST00000478343 297 ntBASIC6.87□□□□□ -1.31
MBD4O95243 DUTP1-201ENST00000493631 470 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AC109481.1-201ENST00000509173 282 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.87□□□□□ -1.31
MBD4O95243 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.87□□□□□ -1.31
MBD4O95243 SNORA81.2-201ENST00000516868 170 ntBASIC6.87□□□□□ -1.31
MBD4O95243 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.87□□□□□ -1.31
MBD4O95243 AL121594.2-201ENST00000541658 472 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.87□□□□□ -1.31
MBD4O95243 AC011445.2-201ENST00000599274 173 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AC117490.2-201ENST00000610042 594 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AC004477.3-201ENST00000614061 590 ntBASIC6.87□□□□□ -1.31
MBD4O95243 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.87□□□□□ -1.31
MBD4O95243 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
MBD4O95243 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.87□□□□□ -1.31
MBD4O95243 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.87□□□□□ -1.31
MBD4O95243 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.87□□□□□ -1.31
MBD4O95243 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MBD4O95243 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
MBD4O95243 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
MBD4O95243 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MBD4O95243 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
MBD4O95243 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
MBD4O95243 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
MBD4O95243 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
MBD4O95243 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
MBD4O95243 AC112255.1-201ENST00000624070 2493 ntBASIC6.86□□□□□ -1.31
MBD4O95243 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
MBD4O95243 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
MBD4O95243 RNU4-23P-201ENST00000362839 140 ntBASIC6.86□□□□□ -1.31
MBD4O95243 RNU6-1331P-201ENST00000363658 106 ntBASIC6.86□□□□□ -1.31
MBD4O95243 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.86□□□□□ -1.31
MBD4O95243 RN7SKP206-201ENST00000410823 293 ntBASIC6.86□□□□□ -1.31
MBD4O95243 RMRPP5-201ENST00000411156 267 ntBASIC6.86□□□□□ -1.31
MBD4O95243 VN1R31P-201ENST00000417498 730 ntBASIC6.86□□□□□ -1.31
MBD4O95243 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.86□□□□□ -1.31
MBD4O95243 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.86□□□□□ -1.31
MBD4O95243 AL390879.1-201ENST00000439143 386 ntBASIC6.86□□□□□ -1.31
MBD4O95243 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.86□□□□□ -1.31
MBD4O95243 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.86□□□□□ -1.31
MBD4O95243 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.86□□□□□ -1.31
MBD4O95243 RPS27AP2-201ENST00000457576 465 ntBASIC6.86□□□□□ -1.31
MBD4O95243 RN7SL72P-201ENST00000460697 269 ntBASIC6.86□□□□□ -1.31
MBD4O95243 RPS3AP15-201ENST00000483874 781 ntBASIC6.86□□□□□ -1.31
MBD4O95243 AGGF1P3-201ENST00000493675 1213 ntBASIC6.86□□□□□ -1.31
MBD4O95243 AC105420.1-201ENST00000504389 582 ntBASIC6.86□□□□□ -1.31
MBD4O95243 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
MBD4O95243 AC106872.4-201ENST00000510050 523 ntBASIC6.86□□□□□ -1.31
MBD4O95243 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.86□□□□□ -1.31
MBD4O95243 snoU109.5-201ENST00000516231 132 ntBASIC6.86□□□□□ -1.31
MBD4O95243 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
MBD4O95243 AC006115.2-201ENST00000596823 202 ntBASIC6.86□□□□□ -1.31
MBD4O95243 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.86□□□□□ -1.31
MBD4O95243 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.86□□□□□ -1.31
MBD4O95243 AL391597.1-201ENST00000618707 694 ntBASIC6.86□□□□□ -1.31
MBD4O95243 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.86□□□□□ -1.31
MBD4O95243 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.86□□□□□ -1.31
MBD4O95243 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.86□□□□□ -1.31
MBD4O95243 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms