Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX3O60493 RPL19P16-201ENST00000433839 588 ntBASIC5.52□□□□□ -1.53
SNX3O60493 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX3O60493 OR52U1P-201ENST00000439752 923 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AL356133.1-201ENST00000444762 372 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX3O60493 AC104849.1-201ENST00000462623 405 ntBASIC5.52□□□□□ -1.53
SNX3O60493 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX3O60493 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SNX3O60493 IGBP1P4-201ENST00000503202 879 ntBASIC5.52□□□□□ -1.53
SNX3O60493 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX3O60493 AP006245.2-201ENST00000522004 300 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AC026616.1-201ENST00000523157 525 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX3O60493 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX3O60493 PMS2P3-207ENST00000529061 717 ntBASIC5.52□□□□□ -1.53
SNX3O60493 TRIM51DP-201ENST00000529746 596 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AC037479.1-201ENST00000558361 625 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX3O60493 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX3O60493 MIR3157-201ENST00000578688 85 ntBASIC5.52□□□□□ -1.53
SNX3O60493 OOSP1P2-201ENST00000579644 351 ntBASIC5.52□□□□□ -1.53
SNX3O60493 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX3O60493 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX3O60493 OR7M1P-201ENST00000608946 533 ntBASIC5.52□□□□□ -1.53
SNX3O60493 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX3O60493 uc_338.7-201ENST00000621834 124 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX3O60493 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX3O60493 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX3O60493 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SNX3O60493 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
SNX3O60493 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX3O60493 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX3O60493 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX3O60493 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX3O60493 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX3O60493 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX3O60493 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX3O60493 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SNX3O60493 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
SNX3O60493 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX3O60493 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX3O60493 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX3O60493 AC003973.3-201ENST00000624863 2822 ntBASIC5.51□□□□□ -1.53
SNX3O60493 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX3O60493 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNX3O60493 RNU1-134P-201ENST00000362935 165 ntBASIC5.51□□□□□ -1.53
SNX3O60493 NPM1P38-201ENST00000403835 865 ntBASIC5.51□□□□□ -1.53
SNX3O60493 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX3O60493 AL033519.1-201ENST00000407266 307 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AL139805.1-201ENST00000407837 289 ntBASIC5.51□□□□□ -1.53
SNX3O60493 UBTFL2-201ENST00000411859 1191 ntBASIC5.51□□□□□ -1.53
SNX3O60493 MTATP6P19-201ENST00000413797 659 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AC096644.3-201ENST00000416788 338 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AC006509.1-201ENST00000420788 634 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AC017019.1-201ENST00000426129 261 ntBASIC5.51□□□□□ -1.53
SNX3O60493 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX3O60493 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX3O60493 AL596266.1-201ENST00000448132 400 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX3O60493 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX3O60493 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX3O60493 AC016687.1-201ENST00000482574 353 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX3O60493 AC008868.1-201ENST00000509786 737 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AC074255.1-201ENST00000511259 501 ntBASIC5.51□□□□□ -1.53
SNX3O60493 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX3O60493 AC020937.1-201ENST00000519677 1013 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AC100784.1-201ENST00000522790 310 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AC130366.1-201ENST00000526505 1192 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AP001994.1-201ENST00000527539 826 ntBASIC5.51□□□□□ -1.53
SNX3O60493 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX3O60493 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX3O60493 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.51□□□□□ -1.53
SNX3O60493 AC096996.1-201ENST00000563813 325 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AC025283.1-201ENST00000572039 734 ntBASIC5.51□□□□□ -1.53
SNX3O60493 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SNX3O60493 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.51□□□□□ -1.53
SNX3O60493 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX3O60493 AC068726.1-201ENST00000610993 341 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AL118556.2-201ENST00000614375 824 ntBASIC5.51□□□□□ -1.53
SNX3O60493 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX3O60493 AL353684.1-201ENST00000622677 1120 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AC068213.1-201ENST00000625124 226 ntBASIC5.51□□□□□ -1.53
SNX3O60493 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX3O60493 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX3O60493 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX3O60493 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX3O60493 AC000374.1-201ENST00000434698 1745 ntBASIC5.51□□□□□ -1.53
SNX3O60493 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX3O60493 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.5□□□□□ -1.53
SNX3O60493 AC004817.4-201ENST00000602396 3625 ntBASIC5.5□□□□□ -1.53
SNX3O60493 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX3O60493 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX3O60493 AC007842.1-201ENST00000597336 2039 ntBASIC5.5□□□□□ -1.53
SNX3O60493 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX3O60493 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
SNX3O60493 AL080312.1-201ENST00000256654 824 ntBASIC5.5□□□□□ -1.53
SNX3O60493 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms