Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SAMMSON-227ENST00000642114 1199 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.48□□□□□ -1.69
SSSCA1O60232 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.48□□□□□ -1.69
SSSCA1O60232 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.48□□□□□ -1.69
SSSCA1O60232 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SSSCA1O60232 MT-RNR2-201ENST00000387347 1559 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.48□□□□□ -1.69
SSSCA1O60232 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.48□□□□□ -1.69
SSSCA1O60232 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.47□□□□□ -1.69
SSSCA1O60232 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SSSCA1O60232 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
SSSCA1O60232 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.47□□□□□ -1.69
SSSCA1O60232 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SSSCA1O60232 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.47□□□□□ -1.69
SSSCA1O60232 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SSSCA1O60232 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SSSCA1O60232 RPL12P9-201ENST00000412942 488 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.47□□□□□ -1.69
SSSCA1O60232 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.47□□□□□ -1.69
SSSCA1O60232 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.47□□□□□ -1.69
SSSCA1O60232 AC090018.1-201ENST00000434369 367 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
SSSCA1O60232 AC016772.1-201ENST00000444170 1261 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 AL596266.1-201ENST00000448132 400 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 AC005077.1-201ENST00000449226 375 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 PPIAP32-201ENST00000449940 472 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 PRPF38AP1-201ENST00000451976 933 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 AL358876.1-201ENST00000453364 1075 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 AP000797.2-201ENST00000475768 606 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 RN7SL273P-201ENST00000481561 299 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 AC073610.1-201ENST00000489971 396 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 RN7SL57P-201ENST00000493687 290 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 AC023424.1-201ENST00000496058 459 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.47□□□□□ -1.69
SSSCA1O60232 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.47□□□□□ -1.69
SSSCA1O60232 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.47□□□□□ -1.69
SSSCA1O60232 AL158068.1-201ENST00000506116 616 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 AC093325.1-201ENST00000508378 326 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 AC016559.2-201ENST00000510759 359 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.47□□□□□ -1.69
SSSCA1O60232 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.47□□□□□ -1.69
SSSCA1O60232 WBP1LP3-201ENST00000523033 208 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.47□□□□□ -1.69
SSSCA1O60232 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.47□□□□□ -1.69
SSSCA1O60232 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.47□□□□□ -1.69
SSSCA1O60232 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.47□□□□□ -1.69
SSSCA1O60232 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.47□□□□□ -1.69
SSSCA1O60232 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.47□□□□□ -1.69
SSSCA1O60232 AC004801.6-201ENST00000616571 978 ntBASIC4.47□□□□□ -1.69
SSSCA1O60232 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
SSSCA1O60232 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SSSCA1O60232 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
SSSCA1O60232 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSSCA1O60232 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.47□□□□□ -1.69
SSSCA1O60232 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.47□□□□□ -1.69
SSSCA1O60232 AC022417.1-201ENST00000624768 1303 ntBASIC4.46□□□□□ -1.69
SSSCA1O60232 AC007842.1-201ENST00000597336 2039 ntBASIC4.46□□□□□ -1.69
SSSCA1O60232 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SSSCA1O60232 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.46□□□□□ -1.69
SSSCA1O60232 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSSCA1O60232 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SSSCA1O60232 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSSCA1O60232 Z83820.1-201ENST00000456978 1499 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSSCA1O60232 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSSCA1O60232 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSSCA1O60232 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSSCA1O60232 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.46□□□□□ -1.7
SSSCA1O60232 SNORA48.4-201ENST00000391089 134 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.46□□□□□ -1.7
SSSCA1O60232 PCNPP4-201ENST00000414817 517 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.46□□□□□ -1.7
SSSCA1O60232 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.46□□□□□ -1.7
SSSCA1O60232 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.46□□□□□ -1.7
SSSCA1O60232 HSPD1P12-201ENST00000429127 1069 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 AC126120.1-201ENST00000431082 470 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms