Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX4O60224 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX4O60224 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SSX4O60224 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX4O60224 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX4O60224 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SSX4O60224 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX4O60224 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SSX4O60224 SNORA27.3-201ENST00000364937 134 ntBASIC5.42□□□□□ -1.54
SSX4O60224 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SSX4O60224 AL157702.1-201ENST00000398764 426 ntBASIC5.42□□□□□ -1.54
SSX4O60224 IPPKP1-201ENST00000422501 768 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AL034379.1-201ENST00000423216 253 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX4O60224 AC003989.1-201ENST00000434569 565 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AL731534.1-201ENST00000434711 269 ntBASIC5.42□□□□□ -1.54
SSX4O60224 ARL5AP3-201ENST00000439327 386 ntBASIC5.42□□□□□ -1.54
SSX4O60224 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX4O60224 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX4O60224 MED28P3-201ENST00000444288 531 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX4O60224 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.42□□□□□ -1.54
SSX4O60224 OR2AF1P-201ENST00000454899 889 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX4O60224 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX4O60224 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX4O60224 RBBP4P1-201ENST00000502424 1276 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX4O60224 RNU6-491P-201ENST00000516099 110 ntBASIC5.42□□□□□ -1.54
SSX4O60224 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX4O60224 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX4O60224 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX4O60224 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX4O60224 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX4O60224 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX4O60224 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX4O60224 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX4O60224 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.42□□□□□ -1.54
SSX4O60224 AC002069.2-201ENST00000603580 883 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AC073046.2-201ENST00000604756 527 ntBASIC5.42□□□□□ -1.54
SSX4O60224 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX4O60224 AL008723.3-201ENST00000608926 449 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AC015922.4-201ENST00000612568 690 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AL096712.1-201ENST00000614561 159 ntBASIC5.42□□□□□ -1.54
SSX4O60224 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SSX4O60224 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX4O60224 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX4O60224 AC003992.1-201ENST00000635364 557 ntBASIC5.42□□□□□ -1.54
SSX4O60224 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.42□□□□□ -1.54
SSX4O60224 AL161756.3-201ENST00000641216 2071 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AC112255.1-201ENST00000624070 2493 ntBASIC5.42□□□□□ -1.54
SSX4O60224 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX4O60224 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SSX4O60224 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX4O60224 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX4O60224 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.42□□□□□ -1.54
SSX4O60224 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.42□□□□□ -1.54
SSX4O60224 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSX4O60224 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.42□□□□□ -1.54
SSX4O60224 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX4O60224 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX4O60224 DDX18P6-201ENST00000450119 1997 ntBASIC5.42□□□□□ -1.54
SSX4O60224 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSX4O60224 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 AC026523.2-201ENST00000625039 7739 ntBASIC5.41□□□□□ -1.54
SSX4O60224 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX4O60224 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.41□□□□□ -1.54
SSX4O60224 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SSX4O60224 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.41□□□□□ -1.54
SSX4O60224 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SSX4O60224 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX4O60224 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.41□□□□□ -1.54
SSX4O60224 AL157884.1-201ENST00000424561 454 ntBASIC5.41□□□□□ -1.54
SSX4O60224 NAP1L4P2-201ENST00000425958 899 ntBASIC5.41□□□□□ -1.54
SSX4O60224 RNF19BPX-201ENST00000426224 625 ntBASIC5.41□□□□□ -1.54
SSX4O60224 FAR1P1-201ENST00000427163 934 ntBASIC5.41□□□□□ -1.54
SSX4O60224 IGLV3-4-201ENST00000432300 244 ntBASIC5.41□□□□□ -1.54
SSX4O60224 AC094019.1-201ENST00000434678 472 ntBASIC5.41□□□□□ -1.54
SSX4O60224 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX4O60224 AC242426.1-201ENST00000435270 960 ntBASIC5.41□□□□□ -1.54
SSX4O60224 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SSX4O60224 RPL5P25-201ENST00000441148 775 ntBASIC5.41□□□□□ -1.54
SSX4O60224 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.41□□□□□ -1.54
SSX4O60224 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX4O60224 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX4O60224 AC098847.1-201ENST00000473094 348 ntBASIC5.41□□□□□ -1.54
SSX4O60224 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 SUMO2P4-201ENST00000504193 276 ntBASIC5.41□□□□□ -1.54
SSX4O60224 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms