Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SOX1O00570 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.33□□□□□ -1.24
SOX1O00570 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.33□□□□□ -1.24
SOX1O00570 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 AADACP1-206ENST00000561502 1193 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AC010547.6-201ENST00000571789 193 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 AC015801.1-201ENST00000585651 153 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 AP002884.5-201ENST00000595053 1132 ntBASIC7.33□□□□□ -1.24
SOX1O00570 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 AC006539.2-201ENST00000601729 572 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AC023513.1-201ENST00000604396 691 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AC109454.4-201ENST00000623411 649 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AL049541.2-201ENST00000626377 555 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.33□□□□□ -1.24
SOX1O00570 OR11H2-202ENST00000641517 1085 ntBASIC7.33□□□□□ -1.24
SOX1O00570 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.33□□□□□ -1.24
SOX1O00570 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 AC079298.1-201ENST00000625026 1619 ntBASIC7.33□□□□□ -1.24
SOX1O00570 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.33□□□□□ -1.24
SOX1O00570 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
SOX1O00570 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
SOX1O00570 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 CR848007.1-201ENST00000442354 1699 ntBASIC7.32□□□□□ -1.24
SOX1O00570 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 LPAL2-203ENST00000454031 2498 ntBASIC7.32□□□□□ -1.24
SOX1O00570 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.32□□□□□ -1.24
SOX1O00570 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 OR9K1P-201ENST00000326513 941 ntBASIC7.32□□□□□ -1.24
SOX1O00570 Y_RNA.41-201ENST00000362646 102 ntBASIC7.32□□□□□ -1.24
SOX1O00570 RN7SKP162-201ENST00000363605 345 ntBASIC7.32□□□□□ -1.24
SOX1O00570 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.32□□□□□ -1.24
SOX1O00570 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.32□□□□□ -1.24
SOX1O00570 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.32□□□□□ -1.24
SOX1O00570 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 MGAT2P2-201ENST00000427194 797 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.32□□□□□ -1.24
SOX1O00570 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.32□□□□□ -1.24
SOX1O00570 PFN1P11-201ENST00000445829 389 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.32□□□□□ -1.24
SOX1O00570 RPL23AP28-201ENST00000448062 470 ntBASIC7.32□□□□□ -1.24
SOX1O00570 SNX18P26-201ENST00000458433 740 ntBASIC7.32□□□□□ -1.24
SOX1O00570 RN7SL706P-201ENST00000460079 292 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AC126182.1-201ENST00000478134 357 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AL024509.2-201ENST00000493462 493 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.32□□□□□ -1.24
SOX1O00570 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 NDUFB5P1-201ENST00000508134 564 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AC091849.1-201ENST00000509920 121 ntBASIC7.32□□□□□ -1.24
SOX1O00570 PGAM4P2-201ENST00000512491 721 ntBASIC7.32□□□□□ -1.24
SOX1O00570 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.32□□□□□ -1.24
SOX1O00570 OR4R3P-201ENST00000525084 838 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.32□□□□□ -1.24
SOX1O00570 AC016957.1-201ENST00000534895 309 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.32□□□□□ -1.24
SOX1O00570 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC7.32□□□□□ -1.24
SOX1O00570 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC7.32□□□□□ -1.24
SOX1O00570 AC006530.1-201ENST00000555980 571 ntBASIC7.32□□□□□ -1.24
SOX1O00570 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC7.32□□□□□ -1.24
SOX1O00570 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.32□□□□□ -1.24
SOX1O00570 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.32□□□□□ -1.24
SOX1O00570 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.32□□□□□ -1.24
SOX1O00570 AC091133.5-201ENST00000603088 301 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AC091965.4-201ENST00000607691 587 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AC026368.1-201ENST00000614934 690 ntBASIC7.32□□□□□ -1.24
SOX1O00570 AC008083.4-201ENST00000615076 444 ntBASIC7.32□□□□□ -1.24
SOX1O00570 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SOX1O00570 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SOX1O00570 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 ZNF806-201ENST00000438300 1774 ntBASIC7.32□□□□□ -1.24
SOX1O00570 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SOX1O00570 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.32□□□□□ -1.24
SOX1O00570 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 AKAP17BP-201ENST00000431706 2719 ntBASIC7.32□□□□□ -1.24
SOX1O00570 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.32□□□□□ -1.24
SOX1O00570 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms