Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC135626.1-201ENST00000556983 435 ntBASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AL356801.1-201ENST00000559320 294 ntBASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AL139099.4-201ENST00000614802 114 ntBASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AP005431.1-201ENST00000618479 319 ntBASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC005618.4-201ENST00000625053 554 ntBASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 MIR193BHG-214ENST00000641765 509 ntBASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC009962.1-201ENST00000567327 3813 ntBASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AP000473.2-201ENST00000602659 1537 ntBASIC4.62□□□□□ -1.67
TCRBV4S1A1TA0A5B7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC109446.4-201ENST00000623235 2755 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 RN7SKP77-201ENST00000363261 353 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 RNA5SP242-201ENST00000364171 118 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 OR7E101P-201ENST00000400428 513 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AL513325.1-201ENST00000417716 1034 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AK4P4-201ENST00000419465 646 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 KIF4CP-201ENST00000422742 1279 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AL354766.1-201ENST00000423396 542 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 VTI1BP4-201ENST00000427516 527 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC099670.2-201ENST00000435130 321 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AL445928.1-201ENST00000435545 222 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 RPS7P3-201ENST00000443360 580 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC074386.1-201ENST00000476560 767 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 MIR2117-201ENST00000516780 80 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 MIR6768-201ENST00000610734 72 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AL049767.1-202ENST00000637826 242 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AP005435.3-201ENST00000531260 3198 ntBASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
TCRBV4S1A1TA0A5B7 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 RNU1-150P-201ENST00000362491 162 ntBASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 RN7SKP292-201ENST00000365522 317 ntBASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 PEX12P1-201ENST00000400284 1048 ntBASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 RN7SKP229-201ENST00000410465 302 ntBASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 VN1R21P-201ENST00000426703 765 ntBASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 DEFA9P-201ENST00000433042 285 ntBASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC138761.5-201ENST00000433967 325 ntBASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 AC006539.1-201ENST00000481419 501 ntBASIC4.6□□□□□ -1.67
TCRBV4S1A1TA0A5B7 RN7SL273P-201ENST00000481561 299 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms