Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC107021.2-201ENST00000567714 2095 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AL606537.1-201ENST00000607258 2011 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC027228.2-201ENST00000567141 2154 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC087752.1-201ENST00000391360 558 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AL096711.1-201ENST00000404780 554 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC106901.1-201ENST00000425086 698 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 MED28P3-201ENST00000444288 531 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC005077.1-201ENST00000449226 375 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC009963.3-201ENST00000458090 486 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC006539.1-201ENST00000481419 501 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 PRMT5P1-201ENST00000514351 598 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 RN7SKP183-201ENST00000517169 324 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 OR8Q1P-201ENST00000526467 655 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC084121.1-201ENST00000533882 835 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AL845552.1-201ENST00000556820 323 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AL513327.3-201ENST00000602618 469 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC244100.4-201ENST00000617747 388 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 MIR6806-201ENST00000622141 64 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC019072.1-201ENST00000604535 1551 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC104966.1-201ENST00000467010 1464 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 AC093225.1-201ENST00000506867 1408 ntBASIC5.06□□□□□ -1.6
RHBDD3Q9Y3P4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC011933.2-201ENST00000578539 2790 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC109446.4-201ENST00000623235 2755 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 FBXL21-201ENST00000297158 1305 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 RN7SKP185-201ENST00000362813 326 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AL589994.1-201ENST00000404962 340 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 KIF4CP-201ENST00000422742 1279 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AL354766.1-201ENST00000423396 542 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 RPL5P2-201ENST00000429598 854 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 ATP5LP2-201ENST00000440646 311 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 VN1R96P-201ENST00000446052 858 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AP002371.1-201ENST00000463604 433 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC016687.1-201ENST00000482574 353 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.05□□□□□ -1.6
RHBDD3Q9Y3P4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 478.1 ms