Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COPS3Q9UNS2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COPS3Q9UNS2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.13□□□□□ -1.59
COPS3Q9UNS2 MIPEPP2-201ENST00000422560 1819 ntBASIC5.13□□□□□ -1.59
COPS3Q9UNS2 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.13□□□□□ -1.59
COPS3Q9UNS2 AC104964.3-201ENST00000606115 2860 ntBASIC5.13□□□□□ -1.59
COPS3Q9UNS2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COPS3Q9UNS2 AL078621.3-201ENST00000623707 2042 ntBASIC5.13□□□□□ -1.59
COPS3Q9UNS2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 MIR191-201ENST00000384873 92 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 YWHAZP6-201ENST00000399764 738 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 GAPDHP59-201ENST00000435908 267 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AC005017.1-201ENST00000482002 490 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 SETP21-201ENST00000514799 892 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AP001000.1-201ENST00000526843 742 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 MT1CP-201ENST00000567054 174 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AC073389.3-201ENST00000609434 935 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AC015819.1-201ENST00000613588 663 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AC022960.2-201ENST00000616300 666 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AL357140.4-201ENST00000636827 412 ntBASIC5.12□□□□□ -1.59
COPS3Q9UNS2 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
COPS3Q9UNS2 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 RN7SKP145-201ENST00000363291 303 ntBASIC5.11□□□□□ -1.59
COPS3Q9UNS2 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 OOSP1-201ENST00000398992 1270 ntBASIC5.11□□□□□ -1.59
COPS3Q9UNS2 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 RNGTTP1-201ENST00000420965 728 ntBASIC5.11□□□□□ -1.59
COPS3Q9UNS2 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 VN1R21P-201ENST00000426703 765 ntBASIC5.11□□□□□ -1.59
COPS3Q9UNS2 RPSAP32-201ENST00000432681 526 ntBASIC5.11□□□□□ -1.59
COPS3Q9UNS2 GAPDHP48-201ENST00000436626 961 ntBASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 GLUD1P3-202ENST00000508551 200 ntBASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AC116917.1-201ENST00000520558 305 ntBASIC5.11□□□□□ -1.59
COPS3Q9UNS2 KCTD9P6-201ENST00000522306 950 ntBASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AC091078.2-201ENST00000557145 559 ntBASIC5.11□□□□□ -1.59
COPS3Q9UNS2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.11□□□□□ -1.59
COPS3Q9UNS2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms