Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPIPA1Q9UND3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 BCORP1-203ENST00000513194 5093 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC005005.4-201ENST00000623789 16698 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 OR2AT2P-201ENST00000413438 905 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 MARK2P12-201ENST00000420129 585 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 RPL34P3-201ENST00000421454 338 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 KIF4CP-201ENST00000422742 1279 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 RPS27AP2-201ENST00000457576 465 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC104164.1-201ENST00000460282 590 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC022616.2-201ENST00000523185 300 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC010547.6-201ENST00000571789 193 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC015802.2-201ENST00000589690 189 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AL512624.1-201ENST00000613638 469 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC022467.1-201ENST00000614738 749 ntBASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.38□□□□□ -1.55
NPIPA1Q9UND3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 RN7SKP293-201ENST00000411389 296 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AL445928.1-201ENST00000435545 222 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 RPS3AP38-201ENST00000435889 763 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 RPS7P3-201ENST00000443360 580 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 NPM1P19-201ENST00000450070 712 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AC099521.1-201ENST00000482557 334 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 TRBV5-2-201ENST00000489095 273 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AC007225.2-201ENST00000562529 256 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AC021422.1-201ENST00000621212 473 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 AP001153.1-201ENST00000641024 338 ntBASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPIPA1Q9UND3 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms