Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 RN7SL188P-201ENST00000469842 285 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 RPS3AP15-201ENST00000483874 781 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 RN7SL649P-201ENST00000496974 275 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 SNORA70.20-201ENST00000516848 126 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 TRIM77BP-201ENST00000524985 1119 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 AC024405.1-201ENST00000532521 1042 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 HSPE1P2-201ENST00000554777 306 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 NPM1P5-201ENST00000557228 838 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 AC092121.1-201ENST00000569452 202 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 MIR4271-201ENST00000582451 67 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 H3F3BP2-201ENST00000583907 357 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 AL139124.1-201ENST00000609123 421 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 AC007786.3-201ENST00000615154 596 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 MIR6133-201ENST00000617057 108 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 RN7SL544P-201ENST00000617232 284 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 RN7SL763P-201ENST00000620922 284 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 AC092451.3-201ENST00000625067 1343 ntBASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
VPS29Q9UBQ0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 U3.28-201ENST00000391249 210 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 RPS3AP2-201ENST00000407190 754 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 NPM1P18-201ENST00000434232 732 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 MTND2P40-201ENST00000436718 841 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AL359265.1-201ENST00000440296 795 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 IGBP1P3-201ENST00000447449 1000 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AP006222.1-205ENST00000450734 457 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AC087672.1-201ENST00000479876 766 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 GTF2IP11-201ENST00000526931 420 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 HMGB1P42-201ENST00000532126 553 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 OR5AM1P-201ENST00000532136 1032 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AL390318.1-201ENST00000624564 687 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 AL592429.1-201ENST00000403909 1473 ntBASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS29Q9UBQ0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 AC083899.1-201ENST00000454465 3819 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 ABCC13-202ENST00000463099 3842 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 AC018809.2-201ENST00000602436 3823 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 AC144833.1-201ENST00000567953 4089 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 MIR375-201ENST00000362103 64 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 SNORA64.1-201ENST00000362600 132 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 AC245060.4-201ENST00000413293 1121 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 AL133482.1-201ENST00000415988 498 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 RPL7P56-201ENST00000429441 717 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 RPL37P23-201ENST00000492641 294 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 RNA5SP271-201ENST00000516700 88 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 HMGN2P47-201ENST00000559378 272 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 DPPA2P4-201ENST00000563717 878 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 AC067773.1-201ENST00000603284 1094 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms