Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AP001804.1-201ENST00000526868 919 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 RPA2P3-201ENST00000533268 770 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 GLYATL1P2-202ENST00000588046 902 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC091193.1-201ENST00000604640 448 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 KATNBL1P5-201ENST00000605015 517 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AP001437.1-201ENST00000608783 456 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC096586.2-201ENST00000610260 441 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC007683.2-201ENST00000624681 714 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AC006484.1-201ENST00000435086 1884 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AL355834.1-201ENST00000556602 3965 ntBASIC6.27□□□□□ -1.41
DKK3Q9UBP4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DKK3Q9UBP4 AL359976.1-201ENST00000418655 3528 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AC011416.1-201ENST00000514947 1732 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RNU6-618P-201ENST00000363518 112 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 OR7E156P-201ENST00000400303 464 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RN7SKP240-201ENST00000410583 375 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RPS3AP25-201ENST00000411660 793 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 UBE2D3P3-201ENST00000426992 425 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 PSMD10P2-201ENST00000432890 672 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AC016908.1-201ENST00000442571 1219 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 OR13K1P-201ENST00000444577 975 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RNA5SP434-201ENST00000516647 121 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AC092332.1-201ENST00000563684 829 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 MRPS21P8-201ENST00000569196 235 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RN7SL339P-201ENST00000580597 296 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AC004223.2-201ENST00000590309 544 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 Z95327.3-201ENST00000610385 572 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 FAM27E2-201ENST00000619668 403 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 MIR4302-201ENST00000638058 60 ntBASIC6.26□□□□□ -1.41
DKK3Q9UBP4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DKK3Q9UBP4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 CCNT2P1-201ENST00000423082 1315 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC027279.1-201ENST00000568885 4284 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC005725.1-201ENST00000577346 2607 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 OR4K17-201ENST00000315543 1032 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 RNU6-1257P-201ENST00000384625 110 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 MIR433-201ENST00000384837 93 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms