Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 OR8Q1P-201ENST00000526467 655 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.95□□□□□ -1.46
CISHQ9NSE2 OR5AM1P-201ENST00000532136 1032 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.95□□□□□ -1.46
CISHQ9NSE2 RBM22P12-201ENST00000567098 1255 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 H3F3BP2-201ENST00000583907 357 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.95□□□□□ -1.46
CISHQ9NSE2 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.95□□□□□ -1.46
CISHQ9NSE2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.95□□□□□ -1.46
CISHQ9NSE2 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.95□□□□□ -1.46
CISHQ9NSE2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CISHQ9NSE2 AL352984.2-202ENST00000613699 155 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CISHQ9NSE2 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.95□□□□□ -1.46
CISHQ9NSE2 AL357153.4-201ENST00000620487 1016 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 AL512356.3-201ENST00000623005 461 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 AL162456.1-201ENST00000634535 2006 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 LINC01963-201ENST00000562038 3148 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 MARK2P4-201ENST00000503381 2380 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 AC092646.2-201ENST00000431242 2095 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 AC027279.4-201ENST00000624371 2072 ntBASIC5.95□□□□□ -1.46
CISHQ9NSE2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CISHQ9NSE2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CISHQ9NSE2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CISHQ9NSE2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CISHQ9NSE2 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CISHQ9NSE2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CISHQ9NSE2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CISHQ9NSE2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CISHQ9NSE2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CISHQ9NSE2 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CISHQ9NSE2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CISHQ9NSE2 SNORA17A-201ENST00000391185 133 ntBASIC5.94□□□□□ -1.46
CISHQ9NSE2 RPSAP35-201ENST00000413753 818 ntBASIC5.94□□□□□ -1.46
CISHQ9NSE2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 TNPO1P1-201ENST00000423641 1138 ntBASIC5.94□□□□□ -1.46
CISHQ9NSE2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 TMEM97P2-201ENST00000517841 403 ntBASIC5.94□□□□□ -1.46
CISHQ9NSE2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 SNORA17.5-201ENST00000630429 132 ntBASIC5.94□□□□□ -1.46
CISHQ9NSE2 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 AL031123.3-201ENST00000623345 1837 ntBASIC5.94□□□□□ -1.46
CISHQ9NSE2 AL355488.2-201ENST00000609909 2850 ntBASIC5.94□□□□□ -1.46
CISHQ9NSE2 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CISHQ9NSE2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CISHQ9NSE2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CISHQ9NSE2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CISHQ9NSE2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CISHQ9NSE2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 ZNF658B-201ENST00000602828 3408 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CISHQ9NSE2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CISHQ9NSE2 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CISHQ9NSE2 BCORP1-203ENST00000513194 5093 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CISHQ9NSE2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CISHQ9NSE2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 RIMKLBP2-201ENST00000424737 654 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 AL389925.1-201ENST00000432257 728 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 AC019185.1-201ENST00000442718 389 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 LINC02210-201ENST00000444561 288 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 AC073909.1-201ENST00000447112 999 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 AZGP1P2-201ENST00000454506 345 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 SETP20-201ENST00000457046 852 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CISHQ9NSE2 AC027544.3-201ENST00000535082 757 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 AC020978.7-201ENST00000575953 1187 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 MIR1273E-201ENST00000581165 102 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 MIR4420-201ENST00000583944 77 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 FO393422.1-201ENST00000603908 708 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 AL352984.2-201ENST00000611153 546 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CISHQ9NSE2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 KARSP1-201ENST00000451871 1752 ntBASIC5.93□□□□□ -1.46
CISHQ9NSE2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms