Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 ASNSP4-201ENST00000511103 447 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 IGHV4-55-201ENST00000520889 368 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 NPM1P5-201ENST00000557228 838 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC027281.1-201ENST00000574178 758 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 OOSP1P2-201ENST00000579644 351 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC061975.8-201ENST00000587058 721 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AL109653.1-201ENST00000603091 248 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC073333.2-201ENST00000603589 769 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC025588.2-201ENST00000604851 466 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC097467.4-201ENST00000605504 141 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AP002802.2-201ENST00000605877 235 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 LINC02211-204ENST00000642024 1070 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 ICE2P1-201ENST00000512800 1849 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 RN7SKP292-201ENST00000365522 317 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AC234772.1-201ENST00000377927 937 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AL050335.1-201ENST00000396909 869 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AL445238.1-204ENST00000400311 463 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 UBE2V1P11-201ENST00000411559 285 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AL157884.1-201ENST00000424561 454 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AL353662.1-201ENST00000439099 327 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AL358794.1-201ENST00000445689 381 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AC104849.1-201ENST00000462623 405 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 SETP6-201ENST00000479329 568 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AC006539.1-201ENST00000481419 501 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 NPM1P27-201ENST00000502784 830 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 MTCO1P31-201ENST00000506355 492 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 KHDC1P1-201ENST00000511053 508 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 MIR3176-201ENST00000582210 90 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AC005242.1-201ENST00000585658 438 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AC005332.4-201ENST00000592752 579 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AL096803.3-201ENST00000609032 532 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 AL049767.1-202ENST00000637826 242 ntBASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
PDLIM7Q9NR12 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
PDLIM7Q9NR12 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.08□□□□□ -1.28
PDLIM7Q9NR12 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms