Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC010325.3-201ENST00000641084 394 ntBASIC5.14□□□□□ -1.59
HMG20AQ9NP66 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.14□□□□□ -1.59
HMG20AQ9NP66 AC022417.1-201ENST00000624768 1303 ntBASIC5.14□□□□□ -1.59
HMG20AQ9NP66 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
HMG20AQ9NP66 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.14□□□□□ -1.59
HMG20AQ9NP66 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.14□□□□□ -1.59
HMG20AQ9NP66 AC079097.1-201ENST00000512187 1399 ntBASIC5.14□□□□□ -1.59
HMG20AQ9NP66 TRIM51GP-201ENST00000534741 1350 ntBASIC5.14□□□□□ -1.59
HMG20AQ9NP66 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMG20AQ9NP66 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMG20AQ9NP66 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AL132656.3-201ENST00000606384 1595 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AL078621.3-201ENST00000623707 2042 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 RPL21P67-201ENST00000402896 478 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 RN7SKP38-201ENST00000410782 309 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 OR6C64P-201ENST00000419708 825 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AC010086.1-201ENST00000437359 1052 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AL590004.3-202ENST00000445883 451 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 UBE2V2P4-201ENST00000447495 259 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 HMGN1P16-201ENST00000508308 283 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 NACAP5-201ENST00000509863 636 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AC016559.2-201ENST00000510759 359 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AC021269.1-201ENST00000526860 705 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 OR4A42P-201ENST00000531397 938 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AC040958.1-201ENST00000561102 201 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 RPSAP75-201ENST00000605848 301 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AL360270.2-201ENST00000562952 5985 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 FBXL21-201ENST00000297158 1305 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AC104964.3-201ENST00000606115 2860 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 MFSD8-239ENST00000641590 2479 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HMG20AQ9NP66 AC018717.1-201ENST00000457712 1505 ntBASIC5.13□□□□□ -1.59
HMG20AQ9NP66 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC011447.7-201ENST00000624228 1590 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC007618.1-201ENST00000366455 732 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 RNA5SP198-201ENST00000410376 127 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AL096829.1-201ENST00000413677 457 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 COX5BP7-201ENST00000414780 274 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 PSMD10P2-201ENST00000432890 672 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 LINC00328-2P-201ENST00000436585 219 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 RPL12P49-201ENST00000441100 121 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.12□□□□□ -1.59
HMG20AQ9NP66 GTF3AP5-201ENST00000442645 697 ntBASIC5.12□□□□□ -1.59
HMG20AQ9NP66 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms