Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 AL590399.2-201ENST00000427536 309 ntBASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 NANOGP9-201ENST00000439890 892 ntBASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 IGBP1P3-201ENST00000447449 1000 ntBASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 snoU13.29-201ENST00000459370 104 ntBASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 BX284632.1-201ENST00000478218 541 ntBASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 RPS4XP1-201ENST00000482189 787 ntBASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 RN7SKP253-201ENST00000516424 309 ntBASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 DHFRP1-201ENST00000579682 559 ntBASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 SUMO2P15-201ENST00000604285 278 ntBASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.05□□□□□ -1.6
KIAA1549Q9HCM3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 EIF3EP2-201ENST00000423042 1814 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 MIR937-201ENST00000401271 86 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 CYCSP6-201ENST00000434498 302 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 OR6D1P-201ENST00000436165 939 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AL133445.1-201ENST00000467051 452 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 RPL35AP19-201ENST00000469425 329 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 ATP5LP3-201ENST00000514223 304 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 MIR2117-201ENST00000516780 80 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 IGLV3-24-201ENST00000517477 197 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 MIR4260-201ENST00000583107 67 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC060780.2-201ENST00000589047 198 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC004948.1-201ENST00000609858 672 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 RN7SKP160-201ENST00000363804 340 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 RPS3AP38-201ENST00000435889 763 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC108693.1-201ENST00000496068 432 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC008953.1-201ENST00000497334 318 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 RPEP1-201ENST00000504507 658 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 RNA5SP34-201ENST00000516887 130 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC018809.2-201ENST00000602436 3823 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC015712.7-201ENST00000615211 635 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 MIR6826-201ENST00000617808 98 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AC007683.2-201ENST00000624681 714 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 AP004607.3-201ENST00000530354 3915 ntBASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KIAA1549Q9HCM3 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KIAA1549Q9HCM3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.03□□□□□ -1.6
KIAA1549Q9HCM3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
KIAA1549Q9HCM3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
KIAA1549Q9HCM3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KIAA1549Q9HCM3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms