Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RPL7P51-201ENST00000490532 749 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 IGLVIV-64-201ENST00000518581 301 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 IGKV3D-34-201ENST00000522638 302 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 TRIM77BP-201ENST00000524985 1119 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 BNIP3P31-201ENST00000604515 566 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC093388.1-201ENST00000609166 430 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC092681.3-201ENST00000609463 678 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC016957.2-201ENST00000616998 848 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AL049777.1-201ENST00000622740 518 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 MIR4302-201ENST00000638058 60 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 HSPA8P19-201ENST00000505359 1517 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 SNORA27.3-201ENST00000364937 134 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 MIR620-201ENST00000385232 95 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC019205.1-201ENST00000421830 730 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 OR5W1P-201ENST00000423705 938 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 RPL12P16-201ENST00000431098 498 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 CUBNP2-201ENST00000443534 1139 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 ZNF619P1-201ENST00000446539 752 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC023194.2-201ENST00000465398 406 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC092902.1-201ENST00000486999 259 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 OR9N1P-201ENST00000491296 333 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 OR7E99P-201ENST00000505750 922 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC027369.2-201ENST00000528030 440 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 NANOGNBP2-201ENST00000544753 553 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC106785.3-201ENST00000564064 847 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 VN1R81P-201ENST00000602085 372 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC084036.1-201ENST00000609190 508 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC104763.3-201ENST00000613765 618 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AL355974.3-201ENST00000617383 467 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC026124.2-201ENST00000621847 656 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC090506.2-201ENST00000624521 419 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 AC063952.1-203ENST00000634410 658 ntBASIC6.2□□□□□ -1.42
USP29Q9HBJ7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
USP29Q9HBJ7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP29Q9HBJ7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms